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| Field | Value |
|---|---|
| Gene ID | Lj2g3v0781590 |
| Transcript ID | Lj2g3v0781590.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: polyol transporter 5-like [Glycine max] gi|356522722|ref|XP_003529995.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 48 | 48 | – | – | |
| PANTHER | 14 | 519 | 506 | 0 | – | |
| PANTHER | 14 | 519 | 506 | 0 | – | |
| TIGRFAM | 33 | 512 | 480 | 2.40E-104 | ||
| SUPERFAMILY | 36 | 256 | 221 | 9.16E-74 | ||
| Phobius | 49 | 78 | 30 | – | – | |
| TMHMM | 49 | 71 | 23 | – | – | |
| ProSiteProfiles | 53 | 505 | 453 | 50.511 | ||
| Pfam | 54 | 516 | 463 | 5.80E-111 | ||
| CDD | 55 | 500 | 446 | 2.39E-31 | ||
| Gene3D | 61 | 239 | 179 | 2.50E-27 | – | |
| PRINTS | 61 | 71 | 11 | 4.00E-20 | ||
| Phobius | 79 | 83 | 5 | – | – | |
| Phobius | 84 | 106 | 23 | – | – | |
| TMHMM | 86 | 108 | 23 | – | – | |
| Phobius | 107 | 117 | 11 | – | – | |
| ProSitePatterns | 107 | 124 | 18 | – | ||
| Phobius | 118 | 136 | 19 | – | – | |
| TMHMM | 120 | 142 | 23 | – | – | |
| Phobius | 137 | 141 | 5 | – | – | |
| Phobius | 142 | 164 | 23 | – | – | |
| PRINTS | 144 | 163 | 20 | 4.00E-20 | ||
| TMHMM | 146 | 168 | 23 | – | – | |
| ProSitePatterns | 149 | 174 | 26 | – | ||
| Phobius | 165 | 175 | 11 | – | – | |
| TMHMM | 175 | 197 | 23 | – | – | |
| Phobius | 176 | 195 | 20 | – | – | |
| Phobius | 196 | 206 | 11 | – | – | |
| TMHMM | 207 | 229 | 23 | – | – | |
| Phobius | 207 | 229 | 23 | – | – | |
| Phobius | 230 | 308 | 79 | – | – | |
| SUPERFAMILY | 295 | 513 | 219 | 9.16E-74 | ||
| Phobius | 309 | 327 | 19 | – | – | |
| Gene3D | 314 | 513 | 200 | 2.00E-20 | – | |
| PRINTS | 323 | 333 | 11 | 4.00E-20 | ||
| Phobius | 328 | 349 | 22 | – | – | |
| Phobius | 350 | 372 | 23 | – | – | |
| TMHMM | 350 | 372 | 23 | – | – | |
| ProSitePatterns | 368 | 385 | 18 | – | ||
| Phobius | 373 | 380 | 8 | – | – | |
| Phobius | 381 | 404 | 24 | – | – | |
| TMHMM | 382 | 404 | 23 | – | – | |
| Phobius | 405 | 409 | 5 | – | – | |
| Phobius | 410 | 432 | 23 | – | – | |
| TMHMM | 411 | 433 | 23 | – | – | |
| PRINTS | 417 | 438 | 22 | 4.00E-20 | ||
| Phobius | 433 | 452 | 20 | – | – | |
| PRINTS | 440 | 452 | 13 | 4.00E-20 | ||
| Phobius | 453 | 473 | 21 | – | – | |
| Phobius | 474 | 478 | 5 | – | – | |
| TMHMM | 477 | 499 | 23 | – | – | |
| Phobius | 479 | 501 | 23 | – | – | |
| Phobius | 502 | 521 | 20 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v0781590.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v0781590.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.