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Lj2g3v0813500.1

Overview

Field Value
Gene ID Lj2g3v0813500
Transcript ID Lj2g3v0813500.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: transcription factor bHLH68-like isoform 1 [Glycine max] gi|356523767|ref|XP_003530506.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR16223:SF53
3 336 334 4.20E-125 –
PANTHER
PTHR16223
3 336 334 4.20E-125 –
MobiDBLite
mobidb-lite
163 194 32 – –
ProSiteProfiles
PS50888
187 236 50 11.249
IPR011598
CDD
cd00083
197 241 45 1.09E-05 –
SUPERFAMILY
SSF47459
197 248 52 9.55E-10
IPR011598
Gene3D
G3DSA:4.10.280.10
201 243 43 2.80E-07
IPR011598
MobiDBLite
mobidb-lite
250 280 31 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

Genome browser

LORE1 insertions 33

Expression data

Expression pattern

Expression pattern of Lj2g3v0813500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v0813500.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.