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Lj2g3v0914160.1

Overview

Field Value
Gene ID Lj2g3v0914160
Transcript ID Lj2g3v0914160.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: phospholipase A2-alpha-like [Cicer arietinum] gi|502164275|ref|XP_004513106.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
CYTOPLASMIC_DOMAIN
1 11 11 – –
PANTHER
PTHR11716
4 24 21 3.70E-74
IPR001211
PANTHER
PTHR11716:SF54
4 24 21 3.70E-74 –
Phobius
TRANSMEMBRANE
12 33 22 – –
TMHMM
TMhelix
13 35 23 – –
Phobius
NON_CYTOPLASMIC_DOMAIN
34 158 125 – –
CDD
cd04706
42 158 117 8.27E-55 –
PANTHER
PTHR11716:SF54
47 158 112 3.70E-74 –
PANTHER
PTHR11716
47 158 112 3.70E-74
IPR001211
Gene3D
G3DSA:1.20.90.10
58 122 65 1.10E-09
IPR016090
SUPERFAMILY
SSF48619
63 157 95 5.64E-21
IPR016090
ProSitePatterns
PS00118
88 95 8 –
IPR033113

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004623
Molecular function Phospholipase A2 activity Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate.
Subterm of
GO:0005509
Molecular function Calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).
Subterm of
GO:0006644
Biological process Phospholipid metabolic process The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester.
Subterm of
GO:0016042
Biological process Lipid catabolic process The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
Subterm of
GO:0050482
Biological process Arachidonic acid secretion The controlled release of arachidonic acid from a cell or a tissue.
Subterm of

Genome browser

LORE1 insertions 6

Expression data

Expression pattern

Expression pattern of Lj2g3v0914160.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v0914160.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.