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Lj2g3v0915000.1

Overview

Field Value
Gene ID Lj2g3v0915000
Transcript ID Lj2g3v0915000.1
Lotus japonicus genome version MG20 v3.0
Description Heat shock protein [Medicago truncatula] gi|357503425|ref|XP_003622001.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.30.420.40
1 82 82 4.20E-39 –
Pfam
PF00012
1 480 480 6.10E-174
IPR013126
SUPERFAMILY
SSF53067
1 66 66 4.86E-23 –
PANTHER
PTHR19375:SF218
1 488 488 6.60E-264 –
PANTHER
PTHR19375
1 488 488 6.60E-264 –
PRINTS
PR00301
21 41 21 8.20E-48
IPR013126
SUPERFAMILY
SSF53067
73 261 189 5.70E-64 –
ProSitePatterns
PS00329
78 91 14 –
IPR018181
Gene3D
G3DSA:3.30.420.40
83 111 29 9.80E-38 –
PRINTS
PR00301
84 94 11 8.20E-48
IPR013126
Gene3D
G3DSA:3.90.640.10
112 192 81 1.10E-34 –
Coils
Coil
141 161 21 – –
Gene3D
G3DSA:3.30.420.40
197 240 44 9.80E-38 –
PRINTS
PR00301
212 228 17 8.20E-48
IPR013126
PRINTS
PR00301
244 264 21 8.20E-48
IPR013126
Gene3D
G3DSA:2.60.34.10
250 421 172 1.70E-65
IPR029047
SUPERFAMILY
SSF100920
266 422 157 2.49E-48
IPR029047
PRINTS
PR00301
270 289 20 8.20E-48
IPR013126
PRINTS
PR00301
350 366 17 8.20E-48
IPR013126
SUPERFAMILY
SSF100934
417 489 73 2.98E-05
IPR029048
Gene3D
G3DSA:1.20.1270.10
422 480 59 8.10E-07
IPR029048

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

LORE1 insertions 9

Expression data

Expression pattern

Expression pattern of Lj2g3v0915000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v0915000.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.