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Lj2g3v1014150.1

Overview

Field Value
Gene ID Lj2g3v1014150
Transcript ID Lj2g3v1014150.1
Lotus japonicus genome version MG20 v3.0
Description RecName: Full=CASP-like protein N24; AltName: Full=Nodulin 24; Short=MtN24gi|2598569|emb|CAA75572.1| MtN24 [Medicago truncatula] gi|75098068|sp|O24088.1|N24_MEDTR
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 20 20
Phobius 1 80 80
PANTHER 6 235 230 2.50E-46
PANTHER 6 235 230 2.50E-46
MobiDBLite 48 68 21
Pfam 79 225 147 9.60E-24
Phobius 81 102 22
TMHMM 82 101 20
Phobius 103 133 31
Phobius 134 158 25
TMHMM 136 158 23
Phobius 159 178 20
Phobius 179 201 23
TMHMM 179 198 20
Phobius 202 212 11
TMHMM 213 235 23
Phobius 213 232 20
Phobius 233 239 7

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

LORE1 insertions 12

Expression data

Expression pattern

Expression pattern of Lj2g3v1014150.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1014150.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.