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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1019980 |
| Transcript ID | Lj2g3v1019980.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | SAG101 [Medicago truncatula] gi|357496089|ref|XP_003618333.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 364 | 364 | 2.00E-160 | – | |
| PANTHER | 1 | 364 | 364 | 2.00E-160 | – | |
| Phobius | 1 | 31 | 31 | – | – | |
| Phobius | 1 | 10 | 10 | – | – | |
| Gene3D | 4 | 87 | 84 | 1.50E-17 | ||
| Pfam | 6 | 84 | 79 | 3.20E-13 | ||
| SUPERFAMILY | 6 | 87 | 82 | 6.84E-11 | ||
| Phobius | 11 | 26 | 16 | – | – | |
| TMHMM | 12 | 31 | 20 | – | – | |
| Phobius | 27 | 31 | 5 | – | – | |
| Phobius | 32 | 471 | 440 | – | – | |
| Gene3D | 414 | 452 | 39 | 1.50E-17 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Lipid metabolic process | The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids. |
Expression pattern of Lj2g3v1019980.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1019980.1, powered by CORGI.
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