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Lj2g3v1068760.1

Overview

Field Value
Gene ID Lj2g3v1068760
Transcript ID Lj2g3v1068760.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like [Glycine max] gi|356568694|ref|XP_003552545.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PIRSF
PIRSF037993
7 280 274 1.70E-37
IPR017348
Gene3D
G3DSA:3.30.200.20
11 117 107 8.90E-32 –
PANTHER
PTHR24343
15 287 273 2.90E-169 –
PANTHER
PTHR24343:SF156
15 287 273 2.90E-169 –
SUPERFAMILY
SSF56112
16 280 265 2.63E-89
IPR011009
ProSiteProfiles
PS50011
20 272 253 49.121
IPR000719
Pfam
PF00069
20 272 253 8.70E-71
IPR000719
Gene3D
G3DSA:1.10.510.10
118 273 156 1.70E-63 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0004674
Molecular function Protein serine/threonine kinase activity Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of
GO:0043066
Biological process Negative regulation of apoptotic process Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process.
Subterm of
Negatively regulates

Genome browser

LORE1 insertions 2

Expression data

Expression pattern

Expression pattern of Lj2g3v1068760.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1068760.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.