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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1105310 |
| Transcript ID | Lj2g3v1105310.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein COBRA-like [Glycine max] gi|356568809|ref|XP_003552600.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 25 | 25 | – | – | |
| Phobius | 1 | 25 | 25 | – | – | |
| Phobius | 1 | 3 | 3 | – | – | |
| PANTHER | 1 | 252 | 252 | 5.80E-177 | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| Phobius | 4 | 19 | 16 | – | – | |
| Phobius | 20 | 25 | 6 | – | – | |
| ProDom | 21 | 212 | 192 | 2.00E-86 | ||
| Phobius | 26 | 252 | 227 | – | – | |
| Pfam | 49 | 213 | 165 | 1.10E-67 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cellulose microfibril organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cellulose microfibril, any of the cellulose structures laid down in orthogonal layers in a plant cell wall. | ||
| Cellular component | Anchored component of membrane | The component of a membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping. |
Expression pattern of Lj2g3v1105310.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1105310.1, powered by CORGI.
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