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Lj2g3v1196530.2

Overview

Field Value
Gene ID Lj2g3v1196530
Transcript ID Lj2g3v1196530.2
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description aminoalcoholphosphotransferase [Glycine max] gi|530088|gb|AAA67719.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 304 304 3.20E-165
SignalP 1 17 17
PANTHER 1 304 304 3.20E-165
Phobius 1 22 22
Phobius 1 4 4
Phobius 5 15 11
Phobius 16 22 7
Phobius 23 45 23
TMHMM 28 50 23
Phobius 46 70 25
TMHMM 57 76 20
Phobius 71 90 20
TMHMM 91 111 21
Phobius 91 111 21
Phobius 112 122 11
Phobius 123 146 24
TMHMM 124 146 23
Phobius 147 166 20
TMHMM 166 188 23
Phobius 167 190 24
Phobius 191 201 11
TMHMM 195 217 23
Phobius 202 220 19
Phobius 221 231 11
Phobius 232 250 19
TMHMM 232 251 20
Phobius 251 275 25
TMHMM 264 286 23
Phobius 276 297 22
Phobius 298 304 7

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of Lj2g3v1196530.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1196530.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.