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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1365810 |
| Transcript ID | Lj2g3v1365810.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Glycine max] gi|356498069|ref|XP_003517876.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 36 | 36 | 7.19E-07 | ||
| ProSiteProfiles | 1 | 37 | 37 | 9.444 | ||
| Pfam | 1 | 34 | 34 | 4.90E-09 | ||
| PANTHER | 1 | 236 | 236 | 0 | – | |
| PANTHER | 1 | 236 | 236 | 0 | – | |
| Gene3D | 2 | 36 | 35 | 1.30E-06 | ||
| MobiDBLite | 71 | 149 | 79 | – | – | |
| ProSiteProfiles | 163 | 232 | 70 | 12.818 | ||
| SUPERFAMILY | 167 | 230 | 64 | 3.01E-16 | ||
| Gene3D | 168 | 229 | 62 | 7.00E-16 | ||
| Pfam | 187 | 229 | 43 | 1.20E-12 | ||
| MobiDBLite | 259 | 286 | 28 | – | – | |
| PANTHER | 296 | 609 | 314 | 0 | – | |
| PANTHER | 296 | 609 | 314 | 0 | – | |
| SMART | 325 | 425 | 101 | 6.70E-55 | ||
| Pfam | 328 | 418 | 91 | 4.80E-34 | ||
| MobiDBLite | 717 | 935 | 219 | – | – | |
| PANTHER | 817 | 850 | 34 | 0 | – | |
| PANTHER | 817 | 850 | 34 | 0 | – | |
| PANTHER | 874 | 1123 | 250 | 0 | – | |
| PANTHER | 874 | 1123 | 250 | 0 | – | |
| Pfam | 979 | 1123 | 145 | 2.30E-36 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of Lj2g3v1365810.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1365810.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.