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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1365810 |
| Transcript ID | Lj2g3v1365810.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Glycine max] gi|356498069|ref|XP_003517876.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 36 | 36 | 7.32E-07 | ||
| PANTHER | 1 | 252 | 252 | 0 | – | |
| ProSiteProfiles | 1 | 37 | 37 | 9.444 | ||
| Pfam | 1 | 34 | 34 | 5.00E-09 | ||
| PANTHER | 1 | 252 | 252 | 0 | – | |
| Gene3D | 2 | 36 | 35 | 1.30E-06 | ||
| MobiDBLite | 71 | 152 | 82 | – | – | |
| Gene3D | 178 | 245 | 68 | 2.30E-16 | ||
| SUPERFAMILY | 178 | 245 | 68 | 1.44E-16 | ||
| ProSiteProfiles | 179 | 248 | 70 | 13.411 | ||
| Pfam | 203 | 245 | 43 | 1.30E-12 | ||
| MobiDBLite | 271 | 302 | 32 | – | – | |
| PANTHER | 312 | 625 | 314 | 0 | – | |
| PANTHER | 312 | 625 | 314 | 0 | – | |
| SMART | 341 | 441 | 101 | 6.70E-55 | ||
| Pfam | 344 | 434 | 91 | 4.90E-34 | ||
| MobiDBLite | 733 | 951 | 219 | – | – | |
| PANTHER | 833 | 866 | 34 | 0 | – | |
| PANTHER | 833 | 866 | 34 | 0 | – | |
| PANTHER | 890 | 1139 | 250 | 0 | – | |
| PANTHER | 890 | 1139 | 250 | 0 | – | |
| Pfam | 995 | 1139 | 145 | 2.30E-36 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of Lj2g3v1365810.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1365810.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.