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Lj2g3v1415430.1

Overview

Field Value
Gene ID Lj2g3v1415430
Transcript ID Lj2g3v1415430.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: ribose-phosphate pyrophosphokinase 3, mitochondrial-like [Glycine max] gi|356497736|ref|XP_003517715.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10210:SF45
97 418 322 1.40E-210 –
PANTHER
PTHR10210
97 418 322 1.40E-210 –
Gene3D
G3DSA:3.40.50.2020
103 271 169 3.70E-16
IPR029057
SUPERFAMILY
SSF53271
106 269 164 1.70E-14
IPR029057
SMART
SM01400
108 225 118 1.70E-14 –
Pfam
PF13793
109 222 114 1.40E-06
IPR029099
CDD
cd06223
260 373 114 1.80E-13
IPR000836
Gene3D
G3DSA:3.40.50.2020
272 392 121 1.00E-24
IPR029057
SUPERFAMILY
SSF53271
274 410 137 4.20E-22
IPR029057
Pfam
PF00156
314 358 45 1.20E-09
IPR000836

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0009116
Biological process Nucleoside metabolic process The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine).
Subterm of

Genome browser

LORE1 insertions 7

Expression data

Expression pattern

Expression pattern of Lj2g3v1415430.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1415430.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.