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Lj2g3v1436870.1

Overview

Field	Value
Gene ID	Lj2g3v1436870
Transcript ID	Lj2g3v1436870.1
Lotus japonicus genome version	MG20 v3.0
Description	PREDICTED: histone-lysine N-methyltransferase SUVR3-like [Glycine max] gi\|356574501\|ref\|XP_003555385.1\|
Working Lj name	n.a.

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Prediction algorithm	Identifier	Start	End	Length	E-value	InterPro ID
Gene3D	G3DSA:1.20.1280.50 View details on G3DSA:1.20.1280.50 Search for proteins/transripts with this domain View external data on G3DSA:1.20.1280.50	14	49	36	9.30E-06	–
SUPERFAMILY	SSF81383 View details on SSF81383 Search for proteins/transripts with this domain View external data on SSF81383	14	66	53	1.30E-07	IPR001810 Show description in modal box View details on IPR001810 Search for proteins/transripts with this domain View on EBI InterPro Service
SMART	SM00256 View details on SM00256 Search for proteins/transripts with this domain View external data on SM00256	16	56	41	0.009	IPR001810 Show description in modal box View details on IPR001810 Search for proteins/transripts with this domain View on EBI InterPro Service
PANTHER	PTHR22884:SF332 View details on PTHR22884:SF332 Search for proteins/transripts with this domain View external data on PTHR22884:SF332	32	237	206	6.00E-27	–
PANTHER	PTHR22884 View details on PTHR22884 Search for proteins/transripts with this domain View external data on PTHR22884	32	237	206	6.00E-27	–
Gene3D	G3DSA:2.170.270.10 View details on G3DSA:2.170.270.10 Search for proteins/transripts with this domain View external data on G3DSA:2.170.270.10	50	205	156	3.50E-26	–
SUPERFAMILY	SSF82199 View details on SSF82199 Search for proteins/transripts with this domain View external data on SSF82199	53	207	155	1.29E-23	–

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0005515 View details of GO:0005515 AmiGO InterPro QuickGO	Molecular function	Protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).	Subterm of View details of GO:0005488

Genome browser

Expression data

Expression pattern

Expression pattern of Lj2g3v1436870.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1436870.1, powered by CORGI.

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