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Lj2g3v1468530.1

Overview

Field Value
Gene ID Lj2g3v1468530
Transcript ID Lj2g3v1468530.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: transcription factor MYC2-like [Glycine max] gi|356497663|ref|XP_003517679.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11514:SF43
1 290 290 3.90E-289 –
PANTHER
PTHR11514
1 290 290 3.90E-289 –
Pfam
PF14215
45 229 185 6.10E-57
IPR025610
MobiDBLite
mobidb-lite
302 327 26 – –
PANTHER
PTHR11514:SF43
326 651 326 3.90E-289 –
PANTHER
PTHR11514
326 651 326 3.90E-289 –
MobiDBLite
mobidb-lite
360 474 115 – –
ProSiteProfiles
PS50888
464 513 50 17.193
IPR011598
CDD
cd00083
467 518 52 4.38E-15 –
SUPERFAMILY
SSF47459
467 534 68 7.59E-18
IPR011598
Gene3D
G3DSA:4.10.280.10
468 534 67 1.10E-17
IPR011598
Pfam
PF00010
468 513 46 7.10E-10
IPR011598
SMART
SM00353
470 519 50 1.50E-16
IPR011598
Coils
Coil
510 544 35 – –
MobiDBLite
mobidb-lite
536 564 29 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

Genome browser

LORE1 insertions 3

Expression data

Expression pattern

Expression pattern of Lj2g3v1468530.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1468530.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.