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Lj2g3v1510610.1

Overview

Field Value
Gene ID Lj2g3v1510610
Transcript ID Lj2g3v1510610.1
Lotus japonicus genome version MG20 v3.0
Description DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] gi|334184703|ref|NP_181097.2|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24078:SF193
71 344 274 4.10E-158 –
PANTHER
PTHR24078
71 344 274 4.10E-158 –
SUPERFAMILY
SSF46565
111 187 77 1.15E-18
IPR001623
Gene3D
G3DSA:1.10.287.110
115 186 72 1.20E-18
IPR001623
SMART
SM00271
119 179 61 4.60E-19
IPR001623
ProSiteProfiles
PS50076
120 187 68 15.869
IPR001623
Pfam
PF00226
120 184 65 5.20E-17
IPR001623
CDD
cd06257
120 176 57 6.76E-17
IPR001623
PRINTS
PR00625
122 140 19 2.40E-10
IPR001623
PRINTS
PR00625
140 155 16 2.40E-10
IPR001623
PRINTS
PR00625
159 179 21 2.40E-10
IPR001623
MobiDBLite
mobidb-lite
267 298 32 – –
MobiDBLite
mobidb-lite
335 356 22 – –
PANTHER
PTHR24078:SF193
412 665 254 4.10E-158 –
PANTHER
PTHR24078
412 665 254 4.10E-158 –
Pfam
PF11926
428 631 204 1.90E-60
IPR024593

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

LORE1 insertions 13

Expression data

Expression pattern

Expression pattern of Lj2g3v1510610.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1510610.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.