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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR24078
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 166 results. Now displaying 1 of 4 with 50 rows per page. This search has taken 0.057s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0050619.1
n.a. Curved DNA-binding protein [Medicago truncatula] gi|357495299|ref|XP_003617938.1| chr0 17229260 17232543 -
1 domain prediction
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Lj0g3v0050629.1
n.a. Curved DNA-binding protein [Medicago truncatula] gi|357495299|ref|XP_003617938.1| chr0 17229536 17231213 -
1 domain prediction
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Lj0g3v0067729.1
n.a. Chaperone protein dnaJ [Medicago truncatula] gi|357498605|ref|XP_003619591.1| chr0 24087630 24088562 -
1 domain prediction
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Lj0g3v0076359.1
n.a. PREDICTED: transcription factor DIVARICATA-like isoform X1 [Cicer arietinum] gi|502164758|ref|XP_004513249.1| chr0 29079037 29079739 +
1 domain prediction
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Lj0g3v0077139.1
n.a. Curved DNA-binding protein [Medicago truncatula] gi|357463859|ref|XP_003602211.1| chr0 29531275 29536772 -
1 domain prediction
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Lj0g3v0080719.1
n.a. PREDICTED: dnaJ homolog subfamily B member 13-like [Glycine max] gi|356500637|ref|XP_003519138.1| chr0 31353298 31354957 +
1 domain prediction
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Lj0g3v0084499.1
n.a. PREDICTED: chaperone protein dnaJ 10 [Vitis vinifera] gi|359474938|ref|XP_002283645.2| chr0 33629132 33631068 +
1 domain prediction
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Lj0g3v0084799.1
n.a. PREDICTED: chaperone protein dnaJ 6-like [Glycine max] gi|356500485|ref|XP_003519062.1| chr0 33829436 33832055 +
1 domain prediction
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Lj0g3v0084989.1
n.a. PREDICTED: chaperone protein DnaJ-like [Cicer arietinum] gi|502143216|ref|XP_004505262.1| chr0 33924782 33926257 -
1 domain prediction
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Lj0g3v0089699.1
n.a. MYB transcription factor MYB109 [Glycine max] gi|351727817|ref|NP_001235894.1| chr0 36855445 36857239 -
1 domain prediction
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Lj0g3v0091839.1
n.a. PREDICTED: chaperone protein DnaJ-like isoform X2 [Cicer arietinum] gi|502143781|ref|XP_004505463.1| chr0 38083702 38091426 +
1 domain prediction
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Lj0g3v0107479.1
n.a. PREDICTED: chaperone protein dnaJ 1, mitochondrial-like [Glycine max] gi|356542391|ref|XP_003539650.1| chr0 46362929 46365945 -
1 domain prediction
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Lj0g3v0112449.1
n.a. PREDICTED: dnaJ-like protein R260-like [Glycine max] gi|356525890|ref|XP_003531554.1| chr0 48966070 48966555 +
1 domain prediction
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Lj0g3v0115199.1
n.a. PREDICTED: chaperone protein dnaJ 10-like isoform X1 [Cicer arietinum] gi|502158031|ref|XP_004511002.1| chr0 50601244 50605638 -
1 domain prediction
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Lj0g3v0116049.1
n.a. PREDICTED: chaperone protein dnaJ 1, mitochondrial-like [Glycine max] gi|356557132|ref|XP_003546872.1| chr0 51009482 51010356 +
1 domain prediction
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Lj0g3v0128959.1
n.a. Curved DNA-binding protein [Medicago truncatula] gi|357489993|ref|XP_003615284.1| chr0 58299471 58300399 -
1 domain prediction
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Lj0g3v0129039.1
n.a. PREDICTED: dnaJ homolog subfamily B member 1-like [Cicer arietinum] gi|502147355|ref|XP_004506751.1| chr0 58341057 58345031 -
1 domain prediction
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Lj0g3v0203169.1
n.a. PREDICTED: chaperone protein dnaJ 1, mitochondrial-like [Glycine max] gi|356528564|ref|XP_003532871.1| chr0 100659458 100666752 +
1 domain prediction
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Lj0g3v0203169.2
n.a. PREDICTED: chaperone protein DnaJ-like isoform X3 [Cicer arietinum] gi|502170881|ref|XP_004514938.1| chr0 100660907 100666752 +
1 domain prediction
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Lj0g3v0203169.3
n.a. PREDICTED: chaperone protein dnaJ 1, mitochondrial-like [Glycine max] gi|356542391|ref|XP_003539650.1| chr0 100661504 100666752 +
1 domain prediction
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Lj0g3v0205899.1
n.a. PREDICTED: dnaJ homolog subfamily C member 14-like [Glycine max] gi|356555977|ref|XP_003546304.1| chr0 102512097 102517474 -
1 domain prediction
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Lj0g3v0211709.1
n.a. Chaperone protein dnaJ [Medicago truncatula] gi|357474457|ref|XP_003607513.1| chr0 106692876 106696291 +
1 domain prediction
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Lj0g3v0212129.1
n.a. MYB transcription factor MYB57 [Glycine max] gi|351721486|ref|NP_001235675.1| chr0 106991900 106994399 -
1 domain prediction
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Lj0g3v0221649.1
n.a. PREDICTED: transcription factor DIVARICATA-like isoform X1 [Cicer arietinum] gi|502164758|ref|XP_004513249.1| chr0 113870294 113879963 -
1 domain prediction
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Lj0g3v0221649.2
n.a. PREDICTED: transcription factor DIVARICATA-like isoform X1 [Cicer arietinum] gi|502164758|ref|XP_004513249.1| chr0 113872175 113879963 -
1 domain prediction
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Lj0g3v0234079.1
n.a. PREDICTED: dnaJ homolog subfamily B member 14-like [Glycine max] gi|356510112|ref|XP_003523784.1| chr0 121207511 121207993 -
1 domain prediction
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Lj0g3v0240719.1
n.a. PREDICTED: dnaJ homolog subfamily B member 13-like [Glycine max] gi|356500637|ref|XP_003519138.1| chr0 124948504 124948911 +
1 domain prediction
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Lj0g3v0241359.1
n.a. DnaJ [Medicago truncatula] gi|357453281|ref|XP_003596917.1| chr0 125184487 125186143 -
1 domain prediction
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Lj0g3v0241359.2
n.a. seed maturation protein PM37 [Glycine max] gi|351724545|ref|NP_001238341.1| chr0 125184487 125186143 -
1 domain prediction
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Lj0g3v0258139.1
n.a. Chaperone protein dnaJ [Medicago truncatula] gi|357438881|ref|XP_003589717.1| chr0 134050196 134053313 +
1 domain prediction
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Lj0g3v0267619.2
n.a. PREDICTED: chaperone protein DnaJ-like [Cicer arietinum] gi|502163224|ref|XP_004512766.1| chr0 138657893 138665320 -
1 domain prediction
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Lj0g3v0267619.3
n.a. PREDICTED: chaperone protein DnaJ-like [Glycine max] gi|356522869|ref|XP_003530065.1| chr0 138657893 138665320 -
1 domain prediction
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Lj0g3v0267619.4
n.a. PREDICTED: chaperone protein DnaJ-like [Glycine max] gi|356522869|ref|XP_003530065.1| chr0 138657893 138665320 -
1 domain prediction
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Lj0g3v0289739.1
n.a. PREDICTED: dnaJ homolog subfamily B member 13-like [Glycine max] gi|356500637|ref|XP_003519138.1| chr0 150448243 150448602 +
1 domain prediction
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Lj0g3v0289749.1
n.a. DnaJ homolog subfamily B member 13 [Triticum urartu] gi|474389126|gb|EMS65162.1| chr0 150449403 150451314 +
1 domain prediction
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Lj0g3v0302189.1
n.a. n.a. chr0 157171689 157172833 +
1 domain prediction
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Lj0g3v0338399.1
n.a. PREDICTED: dnaJ homolog subfamily C member 2-like [Glycine max] gi|356553883|ref|XP_003545280.1| chr0 177191633 177192009 +
1 domain prediction
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Lj0g3v0339829.1
n.a. PREDICTED: chaperone protein dnaJ 6-like [Glycine max] gi|356572054|ref|XP_003554185.1| chr0 178046634 178049228 -
1 domain prediction
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Lj0g3v0344319.1
n.a. PREDICTED: chaperone protein DnaJ-like [Glycine max] gi|356525463|ref|XP_003531344.1| chr0 180578328 180584583 -
1 domain prediction
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Lj0g3v0344319.2
n.a. PREDICTED: chaperone protein DnaJ-like [Glycine max] gi|356525463|ref|XP_003531344.1| chr0 180578328 180584583 -
1 domain prediction
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Lj0g3v0345969.1
n.a. PREDICTED: chaperone protein DnaJ-like [Glycine max] gi|356525463|ref|XP_003531344.1| chr0 181474272 181475402 -
1 domain prediction
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Lj0g3v0345979.1
n.a. PREDICTED: chaperone protein DnaJ-like [Glycine max] gi|356540271|ref|XP_003538613.1| chr0 181475514 181480895 -
1 domain prediction
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Lj1g3v0000020.1
n.a. PREDICTED: chaperone protein dnaJ 10-like [Cicer arietinum] gi|502158766|ref|XP_004511274.1| chr1 2089 15721 -
1 domain prediction
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Lj1g3v0246820.1
n.a. PREDICTED: chaperone protein dnaJ 1, mitochondrial-like isoform X2 [Cicer arietinum] gi|502095201|ref|XP_004490397.1| chr1 2517449 2527795 +
1 domain prediction
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Lj1g3v0246820.2
n.a. PREDICTED: chaperone protein dnaJ 1, mitochondrial-like isoform X3 [Cicer arietinum] gi|502095205|ref|XP_004490398.1| chr1 2517521 2525952 +
1 domain prediction
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Lj1g3v0450120.1
n.a. PREDICTED: dnaJ homolog subfamily B member 1-like [Glycine max] gi|356508606|ref|XP_003523046.1| chr1 6047702 6051252 +
1 domain prediction
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Lj1g3v0726920.1
n.a. Chaperone DnaJ-domain superfamily protein isoform 1 [Theobroma cacao] gi|508724229|gb|EOY16126.1| chr1 9656806 9659832 +
1 domain prediction
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Lj1g3v0948660.1
n.a. n.a. chr1 11944859 11950031 +
1 domain prediction
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Lj1g3v0948660.2
n.a. n.a. chr1 11944859 11948774 +
1 domain prediction
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Lj1g3v0948660.3
n.a. n.a. chr1 11944859 11950031 +
1 domain prediction
 –