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Lj2g3v1600870.1

Overview

Field Value
Gene ID Lj2g3v1600870
Transcript ID Lj2g3v1600870.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: SRSF protein kinase 1-like [Cicer arietinum] gi|502161765|ref|XP_004512277.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24055
1 181 181 4.10E-208 –
PANTHER
PTHR24055:SF138
1 181 181 4.10E-208 –
Gene3D
G3DSA:3.30.200.20
21 118 98 9.00E-30 –
CDD
cd14136
27 340 314 7.47E-131 –
SUPERFAMILY
SSF56112
32 181 150 1.40E-67
IPR011009
SMART
SM00220
38 361 324 5.50E-41
IPR000719
ProSiteProfiles
PS50011
38 361 324 29.347
IPR000719
Pfam
PF00069
40 178 139 2.20E-21
IPR000719
ProSitePatterns
PS00107
44 67 24 –
IPR017441
Gene3D
G3DSA:1.10.510.10
119 341 223 4.20E-47 –
ProSitePatterns
PS00108
165 177 13 –
IPR008271
SUPERFAMILY
SSF56112
246 358 113 1.40E-67
IPR011009
PANTHER
PTHR24055
250 340 91 4.10E-208 –
PANTHER
PTHR24055:SF138
250 340 91 4.10E-208 –
Pfam
PF00069
252 335 84 2.80E-14
IPR000719

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 19

Expression data

Expression pattern

Expression pattern of Lj2g3v1600870.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1600870.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.