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Lj2g3v1757070.1

Overview

Field Value
Gene ID Lj2g3v1757070
Transcript ID Lj2g3v1757070.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: ZF-HD homeobox protein At4g24660-like [Glycine max] gi|356496749|ref|XP_003517228.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR31948
1 336 336 3.10E-133 –
PANTHER
PTHR31948:SF9
1 336 336 3.10E-133 –
MobiDBLite
mobidb-lite
21 130 110 – –
Pfam
PF04770
130 181 52 3.70E-29
IPR006456
ProDom
PD125774
130 184 55 1.00E-19
IPR006456
TIGRFAM
TIGR01566
131 181 51 7.30E-28
IPR006456
ProSiteProfiles
PS51523
132 180 49 26.012
IPR006456
MobiDBLite
mobidb-lite
182 218 37 – –
SUPERFAMILY
SSF46689
263 334 72 1.45E-18
IPR009057
Gene3D
G3DSA:1.10.10.60
263 334 72 1.10E-27
IPR009057
TIGRFAM
TIGR01565
273 330 58 5.20E-27
IPR006455

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of

Genome browser

LORE1 insertions 7

Expression data

Expression pattern

Expression pattern of Lj2g3v1757070.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1757070.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.