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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1758430 |
| Transcript ID | Lj2g3v1758430.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable polyol transporter 3-like [Cicer arietinum] gi|502161606|ref|XP_004512223.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 509 | 509 | 4.50E-300 | – | |
| Phobius | 1 | 28 | 28 | – | – | |
| PANTHER | 1 | 509 | 509 | 4.50E-300 | – | |
| TIGRFAM | 15 | 487 | 473 | 4.10E-85 | ||
| SUPERFAMILY | 19 | 236 | 218 | 4.45E-67 | ||
| Phobius | 29 | 57 | 29 | – | – | |
| TMHMM | 32 | 54 | 23 | – | – | |
| ProSiteProfiles | 33 | 481 | 449 | 45.087 | ||
| CDD | 34 | 474 | 441 | 1.68E-29 | ||
| Gene3D | 34 | 233 | 200 | 8.20E-27 | – | |
| Pfam | 35 | 492 | 458 | 1.90E-89 | ||
| PRINTS | 41 | 51 | 11 | 5.70E-20 | ||
| Phobius | 58 | 68 | 11 | – | – | |
| Phobius | 69 | 86 | 18 | – | – | |
| TMHMM | 69 | 91 | 23 | – | – | |
| Phobius | 87 | 97 | 11 | – | – | |
| ProSitePatterns | 87 | 104 | 18 | – | ||
| Phobius | 98 | 116 | 19 | – | – | |
| TMHMM | 98 | 117 | 20 | – | – | |
| Phobius | 117 | 121 | 5 | – | – | |
| TMHMM | 122 | 144 | 23 | – | – | |
| Phobius | 122 | 144 | 23 | – | – | |
| PRINTS | 124 | 143 | 20 | 5.70E-20 | ||
| Phobius | 145 | 155 | 11 | – | – | |
| TMHMM | 156 | 178 | 23 | – | – | |
| Phobius | 156 | 174 | 19 | – | – | |
| Phobius | 175 | 185 | 11 | – | – | |
| Phobius | 186 | 207 | 22 | – | – | |
| TMHMM | 188 | 210 | 23 | – | – | |
| Phobius | 208 | 287 | 80 | – | – | |
| Coils | 229 | 249 | 21 | – | – | |
| SUPERFAMILY | 264 | 489 | 226 | 4.45E-67 | ||
| Phobius | 288 | 312 | 25 | – | – | |
| TMHMM | 289 | 311 | 23 | – | – | |
| Gene3D | 290 | 489 | 200 | 6.70E-19 | – | |
| PRINTS | 299 | 309 | 11 | 5.70E-20 | ||
| Phobius | 313 | 323 | 11 | – | – | |
| Phobius | 324 | 348 | 25 | – | – | |
| TMHMM | 326 | 348 | 23 | – | – | |
| ProSitePatterns | 344 | 361 | 18 | – | ||
| Phobius | 349 | 354 | 6 | – | – | |
| TMHMM | 355 | 377 | 23 | – | – | |
| Phobius | 355 | 378 | 24 | – | – | |
| Phobius | 379 | 389 | 11 | – | – | |
| Phobius | 390 | 415 | 26 | – | – | |
| TMHMM | 392 | 414 | 23 | – | – | |
| PRINTS | 393 | 414 | 22 | 5.70E-20 | ||
| PRINTS | 416 | 428 | 13 | 5.70E-20 | ||
| Phobius | 416 | 426 | 11 | – | – | |
| Phobius | 427 | 447 | 21 | – | – | |
| TMHMM | 427 | 449 | 23 | – | – | |
| Phobius | 448 | 452 | 5 | – | – | |
| Phobius | 453 | 474 | 22 | – | – | |
| TMHMM | 453 | 475 | 23 | – | – | |
| Phobius | 475 | 510 | 36 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v1758430.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1758430.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.