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Lj2g3v1953010.1

Overview

Field Value
Gene ID Lj2g3v1953010
Transcript ID Lj2g3v1953010.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description Chaperone protein dnaJ [Medicago truncatula] gi|357453671|ref|XP_003597116.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 121 121 1.50E-54
PANTHER 1 121 121 1.50E-54
Gene3D 45 124 80 5.70E-23
SUPERFAMILY 48 122 75 1.57E-21
SMART 51 111 61 3.90E-18
ProSiteProfiles 52 119 68 17.984
Pfam 52 116 65 1.30E-19
CDD 52 108 57 1.32E-15
PRINTS 54 72 19 1.10E-11
PRINTS 72 87 16 1.10E-11
PRINTS 91 111 21 1.10E-11
ProSitePatterns 96 115 20
PANTHER 376 499 124 1.50E-54
PANTHER 376 499 124 1.50E-54

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of Lj2g3v1953010.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1953010.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.