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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1968390 |
| Transcript ID | Lj2g3v1968390.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein GAMETE EXPRESSED 1-like [Fragaria vesca subsp]. vesca] gi|470125118|ref|XP_004298553.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 22 | 22 | – | – | |
| Phobius | 1 | 6 | 6 | – | – | |
| SignalP | 1 | 22 | 22 | – | – | |
| PANTHER | 3 | 199 | 197 | 5.80E-200 | – | |
| PANTHER | 3 | 199 | 197 | 5.80E-200 | – | |
| Phobius | 7 | 18 | 12 | – | – | |
| Phobius | 19 | 22 | 4 | – | – | |
| Phobius | 23 | 427 | 405 | – | – | |
| Coils | 172 | 192 | 21 | – | – | |
| Coils | 267 | 301 | 35 | – | – | |
| PANTHER | 281 | 596 | 316 | 5.80E-200 | – | |
| PANTHER | 281 | 596 | 316 | 5.80E-200 | – | |
| Coils | 370 | 390 | 21 | – | – | |
| TMHMM | 428 | 445 | 18 | – | – | |
| Phobius | 428 | 445 | 18 | – | – | |
| Phobius | 446 | 456 | 11 | – | – | |
| TMHMM | 457 | 475 | 19 | – | – | |
| Phobius | 457 | 475 | 19 | – | – | |
| Phobius | 476 | 489 | 14 | – | – | |
| Phobius | 490 | 509 | 20 | – | – | |
| TMHMM | 490 | 509 | 20 | – | – | |
| Phobius | 510 | 596 | 87 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj2g3v1968390.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1968390.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.