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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1984710 |
| Transcript ID | Lj2g3v1984710.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Uncharacterized protein TCM_015725 [Theobroma cacao] gi|508776757|gb|EOY24013.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 37 | 37 | – | – | |
| PANTHER | 23 | 304 | 282 | 3.70E-221 | – | |
| PANTHER | 23 | 304 | 282 | 3.70E-221 | – | |
| Phobius | 38 | 61 | 24 | – | – | |
| TMHMM | 39 | 61 | 23 | – | – | |
| Phobius | 62 | 72 | 11 | – | – | |
| TMHMM | 71 | 93 | 23 | – | – | |
| Phobius | 73 | 92 | 20 | – | – | |
| Phobius | 93 | 112 | 20 | – | – | |
| Phobius | 113 | 132 | 20 | – | – | |
| TMHMM | 114 | 136 | 23 | – | – | |
| Pfam | 121 | 273 | 153 | 3.30E-11 | ||
| Phobius | 133 | 175 | 43 | – | – | |
| Phobius | 176 | 198 | 23 | – | – | |
| TMHMM | 176 | 198 | 23 | – | – | |
| Phobius | 199 | 237 | 39 | – | – | |
| Phobius | 238 | 256 | 19 | – | – | |
| TMHMM | 238 | 257 | 20 | – | – | |
| Phobius | 257 | 261 | 5 | – | – | |
| TMHMM | 261 | 283 | 23 | – | – | |
| Phobius | 262 | 281 | 20 | – | – | |
| Coils | 280 | 303 | 24 | – | – | |
| Phobius | 282 | 304 | 23 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Cysteine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | CAAX-box protein processing | The second process in a series of specific posttranslational modifications to the CAAX box region of CAAX box proteins, in which the last three amino acids of the protein (AAX) are removed by proteolysis. |
Expression pattern of Lj2g3v1984710.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1984710.2, powered by CORGI.
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