Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj2g3v2002270.1

Overview

Field Value
Gene ID Lj2g3v2002270
Transcript ID Lj2g3v2002270.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: adenine phosphoribosyltransferase 1, chloroplastic-like [Cicer arietinum] gi|502160202|ref|XP_004511667.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11776:SF7
1 183 183 1.20E-144 –
PANTHER
PTHR11776
1 183 183 1.20E-144 –
Gene3D
G3DSA:3.40.50.2020
13 181 169 2.70E-85
IPR029057
SUPERFAMILY
SSF53271
13 175 163 9.31E-52
IPR029057
Hamap
MF_00004
14 181 168 35.778
IPR005764
TIGRFAM
TIGR01090
15 181 167 3.50E-63
IPR005764
CDD
cd06223
48 180 133 7.34E-27
IPR000836
Pfam
PF00156
52 166 115 2.20E-20
IPR000836

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003999
Molecular function Adenine phosphoribosyltransferase activity Catalysis of the reaction: AMP + diphosphate = adenine + 5-phospho-alpha-D-ribose 1-diphosphate.
Subterm of
GO:0005737
Cellular component Cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
Subterm of
GO:0006168
Biological process Adenine salvage Any process that generates adenine, 6-aminopurine, from derivatives of it without de novo synthesis.
Subterm of
GO:0009116
Biological process Nucleoside metabolic process The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine).
Subterm of

Genome browser

LORE1 insertions 19

Expression data

Expression pattern

Expression pattern of Lj2g3v2002270.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v2002270.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.