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Lj2g3v2002600.1

Overview

Field Value
Gene ID Lj2g3v2002600
Transcript ID Lj2g3v2002600.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: SNARE-interacting protein KEULE-like isoform X2 [Cicer arietinum] gi|502160145|ref|XP_004511648.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 6 553 548 0
PANTHER 6 553 548 0
Gene3D 12 151 140 6.60E-46
PIRSF 14 657 644 8.30E-175
SUPERFAMILY 19 652 634 9.03E-144
Pfam 45 646 602 1.10E-116
Coils 49 69 21
Gene3D 154 271 118 8.10E-34
Gene3D 272 393 122 8.30E-37
Gene3D 397 517 121 8.10E-14
Gene3D 518 654 137 8.10E-34
MobiDBLite 551 587 37
PANTHER 581 657 77 0
PANTHER 581 657 77 0

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process Vesicle docking involved in exocytosis The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, that contributes to exocytosis.
Biological process Vesicle-mediated transport A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.

LORE1 insertions 16

Expression data

Expression pattern

Expression pattern of Lj2g3v2002600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v2002600.1, powered by CORGI.

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