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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2017630 |
| Transcript ID | Lj2g3v2017630.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: multiple C2 and transmembrane domain-containing protein 1-like [Cicer arietinum] gi|502159940|ref|XP_004511581.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 91 | 91 | 14.349 | ||
| Phobius | 1 | 799 | 799 | – | – | |
| Gene3D | 4 | 129 | 126 | 1.30E-24 | ||
| SUPERFAMILY | 5 | 145 | 141 | 3.41E-25 | ||
| Pfam | 5 | 94 | 90 | 7.40E-17 | ||
| SMART | 5 | 106 | 102 | 8.50E-13 | ||
| CDD | 5 | 131 | 127 | 1.36E-68 | – | |
| MobiDBLite | 134 | 191 | 58 | – | – | |
| PANTHER | 172 | 806 | 635 | 0 | – | |
| PANTHER | 172 | 806 | 635 | 0 | – | |
| Gene3D | 264 | 391 | 128 | 2.00E-30 | ||
| SUPERFAMILY | 268 | 407 | 140 | 5.41E-32 | ||
| SMART | 269 | 365 | 97 | 1.00E-14 | ||
| CDD | 269 | 393 | 125 | 7.96E-62 | – | |
| ProSiteProfiles | 270 | 350 | 81 | 14.201 | ||
| Pfam | 270 | 363 | 94 | 3.50E-18 | ||
| Gene3D | 420 | 563 | 144 | 3.20E-25 | ||
| Pfam | 432 | 537 | 106 | 3.10E-18 | ||
| SUPERFAMILY | 432 | 585 | 154 | 1.35E-30 | ||
| CDD | 433 | 583 | 151 | 1.14E-82 | – | |
| SMART | 433 | 531 | 99 | 3.80E-12 | ||
| ProSiteProfiles | 434 | 516 | 83 | 11.655 | ||
| Gene3D | 590 | 722 | 133 | 1.20E-28 | ||
| Pfam | 594 | 702 | 109 | 3.60E-23 | ||
| SUPERFAMILY | 594 | 738 | 145 | 6.14E-27 | ||
| CDD | 595 | 719 | 125 | 2.09E-60 | – | |
| SMART | 595 | 699 | 105 | 6.40E-14 | ||
| ProSiteProfiles | 596 | 684 | 89 | 10.012 | ||
| Phobius | 800 | 818 | 19 | – | – | |
| TMHMM | 800 | 817 | 18 | – | – | |
| Phobius | 819 | 829 | 11 | – | – | |
| Phobius | 830 | 860 | 31 | – | – | |
| TMHMM | 830 | 852 | 23 | – | – | |
| Pfam | 847 | 1002 | 156 | 8.80E-78 | ||
| Phobius | 861 | 943 | 83 | – | – | |
| PANTHER | 878 | 998 | 121 | 0 | – | |
| PANTHER | 878 | 998 | 121 | 0 | – | |
| Phobius | 944 | 973 | 30 | – | – | |
| TMHMM | 944 | 973 | 30 | – | – | |
| Phobius | 974 | 1002 | 29 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj2g3v2017630.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2017630.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.