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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2017710 |
| Transcript ID | Lj2g3v2017710.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable aquaporin PIP1-4-like [Glycine max] gi|356497240|ref|XP_003517470.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 47 | 47 | – | – | |
| MobiDBLite | 1 | 32 | 32 | – | – | |
| PANTHER | 4 | 279 | 276 | 2.50E-209 | ||
| PANTHER | 4 | 279 | 276 | 2.50E-209 | – | |
| Gene3D | 17 | 277 | 261 | 1.20E-87 | ||
| Pfam | 42 | 272 | 231 | 5.60E-82 | ||
| SUPERFAMILY | 42 | 277 | 236 | 8.11E-65 | ||
| Phobius | 48 | 67 | 20 | – | – | |
| PRINTS | 50 | 69 | 20 | 1.10E-70 | ||
| CDD | 50 | 275 | 226 | 3.02E-77 | ||
| TMHMM | 51 | 73 | 23 | – | – | |
| TIGRFAM | 54 | 271 | 218 | 2.80E-66 | ||
| Phobius | 68 | 87 | 20 | – | – | |
| Phobius | 88 | 111 | 24 | – | – | |
| TMHMM | 88 | 110 | 23 | – | – | |
| PRINTS | 92 | 116 | 25 | 1.10E-70 | ||
| ProSitePatterns | 110 | 118 | 9 | – | ||
| Phobius | 112 | 130 | 19 | – | – | |
| PRINTS | 129 | 148 | 20 | 1.10E-70 | ||
| Phobius | 131 | 151 | 21 | – | – | |
| TMHMM | 131 | 148 | 18 | – | – | |
| Phobius | 152 | 207 | 56 | – | – | |
| TMHMM | 176 | 193 | 18 | – | – | |
| PRINTS | 179 | 197 | 19 | 1.10E-70 | ||
| TMHMM | 206 | 228 | 23 | – | – | |
| Phobius | 208 | 228 | 21 | – | – | |
| PRINTS | 215 | 237 | 23 | 1.10E-70 | ||
| Phobius | 229 | 254 | 26 | – | – | |
| TMHMM | 254 | 276 | 23 | – | – | |
| PRINTS | 255 | 275 | 21 | 1.10E-70 | ||
| Phobius | 255 | 276 | 22 | – | – | |
| Phobius | 277 | 284 | 8 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Channel activity | Enables the energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v2017710.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2017710.1, powered by CORGI.
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