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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2089550 |
| Transcript ID | Lj2g3v2089550.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: angio-associated migratory cell protein-like [Glycine max] gi|356576129|ref|XP_003556186.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 26 | 26 | – | – | |
| PANTHER | 10 | 334 | 325 | 7.70E-180 | – | |
| SMART | 53 | 93 | 41 | 0.0042 | ||
| CDD | 56 | 326 | 271 | 9.93E-55 | – | |
| Pfam | 56 | 88 | 33 | 0.11 | ||
| SUPERFAMILY | 57 | 326 | 270 | 1.46E-65 | ||
| ProSiteProfiles | 60 | 314 | 255 | 46.244 | ||
| Gene3D | 60 | 327 | 268 | 4.90E-69 | ||
| SMART | 96 | 135 | 40 | 1.00E-08 | ||
| Pfam | 102 | 135 | 34 | 2.10E-07 | ||
| ProSiteProfiles | 103 | 135 | 33 | 16.19 | ||
| PRINTS | 122 | 136 | 15 | 4.40E-06 | ||
| SMART | 137 | 176 | 40 | 1.30E-04 | ||
| Pfam | 141 | 176 | 36 | 5.90E-04 | ||
| ProSiteProfiles | 144 | 185 | 42 | 11.411 | ||
| ProSitePatterns | 163 | 177 | 15 | – | ||
| PRINTS | 163 | 177 | 15 | 4.40E-06 | ||
| SMART | 179 | 218 | 40 | 4.50E-08 | ||
| Pfam | 185 | 218 | 34 | 1.80E-07 | ||
| ProSiteProfiles | 186 | 227 | 42 | 15.989 | ||
| PRINTS | 205 | 219 | 15 | 4.40E-06 | ||
| SMART | 221 | 263 | 43 | 0.025 | ||
| Pfam | 222 | 261 | 40 | 0.002 | ||
| SMART | 266 | 305 | 40 | 4.90E-05 | ||
| Pfam | 270 | 305 | 36 | 1.50E-04 | ||
| ProSiteProfiles | 273 | 314 | 42 | 11.745 | ||
| ProSitePatterns | 292 | 306 | 15 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v2089550.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2089550.2, powered by CORGI.
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