Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj2g3v2256380.1

Overview

Field Value
Gene ID Lj2g3v2256380
Transcript ID Lj2g3v2256380.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: dermal papilla-derived protein 6 homolog [Glycine max] gi|356500866|ref|XP_003519251.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 330 330 1.00E-98
PANTHER 1 330 330 1.00E-98
Pfam 127 310 184 2.00E-17
MobiDBLite 317 374 58
PANTHER 349 374 26 1.00E-98
PANTHER 349 374 26 1.00E-98

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process TRNA wobble uridine modification The process in which a uridine in position 34 of a tRNA is post-transcriptionally modified.
Cellular component Elongator holoenzyme complex A heterohexameric protein complex that is involved in modification of wobble nucleosides in tRNA. The complex can associate physically with hyperphosphorylated RNA polymerase II; it contains two discrete heterotrimeric subcomplexes.

Expression data

Expression pattern

Expression pattern of Lj2g3v2256380.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v2256380.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.