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GO:0002098

View this GO term in other databases

Overview

Field Value
Namespace Biological process
Short description TRNA wobble uridine modification
Full defintion The process in which a uridine in position 34 of a tRNA is post-transcriptionally modified.
Subterm of

Relationships

The relationship of GO:0002098 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOChjd
ISBN
TRNATRNA

Dieter Söll · ISBN: 155581073X

Amer Society for Microbiology, 1995 · 572 pages

This is the definitive guide to the rapidly progressing field of tRNA research. Written and edited by acknowledged experts, the book provides an up-to-date account of all aspects of research on tRNA, including its structure, biosynthesis and interaction with the many proteins involved in protein biosynthesis.

Associated Lotus transcripts 48

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0171359.1
– PREDICTED: elongator complex protein 4-like [Glycine max] gi|356504547|ref|XP_003521057.1|
GO terms
2
Lj0g3v0182029.1
– PREDICTED: elongator complex protein 6-like [Cicer arietinum] gi|502103167|ref|XP_004492218.1|
GO terms
2
Lj0g3v0307519.1
– PREDICTED: elongator complex protein 6-like [Cicer arietinum] gi|502103167|ref|XP_004492218.1|
GO terms
2
Lj0g3v0330709.1
– Elongator complex protein [Medicago truncatula] gi|358344187|ref|XP_003636173.1|
GO terms
2
Lj1g3v3330210.1
– Cytoplasmic tRNA 2-thiolation protein [Medicago truncatula] gi|357467587|ref|XP_003604078.1|
GO terms
3
Lj1g3v4251230.2
– PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Cicer arietinum] gi|502108809|ref|XP_004493493.1|
GO terms
3
Lj2g3v2256380.1
– PREDICTED: dermal papilla-derived protein 6 homolog [Glycine max] gi|356500866|ref|XP_003519251.1|
GO terms
2
Lj3g3v0593220.1
– PREDICTED: elongator complex protein 4-like isoform X1 [Cicer arietinum] gi|502173415|ref|XP_004515324.1|
GO terms
2
Lj4g3v2825560.1
– PREDICTED: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-like isoform X2 [Cicer arietinum] gi|502183352|ref|XP_004517119.1|
GO terms
1
Lj4g3v2825560.2
– PREDICTED: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-like isoform X2 [Cicer arietinum] gi|502183352|ref|XP_004517119.1|
GO terms
1
Lj4g3v2825560.4
– TRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Medicago truncatula] gi|357520027|ref|XP_003630302.1|
GO terms
1
Lj5g3v2263990.1
– PREDICTED: elongator complex protein 1-like isoform X2 [Cicer arietinum] gi|502121382|ref|XP_004497296.1|
GO terms
2
LotjaGi1g1v0075200.1
– Elongator complex protein 1; TAIR: AT5G13680.1 IKI3 family protein; Swiss-Prot: sp|Q9FNA4|ELP1_ARATH Elongator complex protein 1; TrEMBL-Plants: tr|A0A072VSS4|A0A072VSS4_MEDTR Elongator complex protein 1; Found in the gene: LotjaGi1g1v0075200
GO terms
2
LotjaGi1g1v0075200.3
– Elongator complex protein 1; TAIR: AT5G13680.1 IKI3 family protein; Swiss-Prot: sp|Q9FNA4|ELP1_ARATH Elongator complex protein 1; TrEMBL-Plants: tr|A0A072VRS1|A0A072VRS1_MEDTR Elongator complex protein 1; Found in the gene: LotjaGi1g1v0075200
GO terms
2
LotjaGi1g1v0075200.4
– Elongator complex protein 1; TAIR: AT5G13680.1 IKI3 family protein; Swiss-Prot: sp|Q9FNA4|ELP1_ARATH Elongator complex protein 1; TrEMBL-Plants: tr|A0A072VSS4|A0A072VSS4_MEDTR Elongator complex protein 1; Found in the gene: LotjaGi1g1v0075200
GO terms
2
LotjaGi1g1v0120300.1
– AT2G18410-like protein; TAIR: AT2G18410.1 elongator complex protein; Swiss-Prot: sp|F4IQJ2|ELP5_ARATH Elongator complex protein 5; TrEMBL-Plants: tr|K7KA66|K7KA66_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0120300
GO terms
2
LotjaGi1g1v0248000.1
– Methyltransferase-like; TAIR: AT1G36310.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q07G10|ALKB8_XENTR Alkylated DNA repair protein alkB homolog 8; TrEMBL-Plants: tr|A0A0R0JQC1|A0A0R0JQC1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0248000
GO terms
2
LotjaGi1g1v0248000.2
– Methyltransferase-like; TAIR: AT1G36310.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q07G10|ALKB8_XENTR Alkylated DNA repair protein alkB homolog 8; TrEMBL-Plants: tr|A0A0R0JQC1|A0A0R0JQC1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0248000
GO terms
2
LotjaGi1g1v0556900.1
– Cytoplasmic tRNA 2-thiolation protein; TAIR: AT2G44270.1 repressor of lrx1; Swiss-Prot: sp|O64862|CTU1_ARATH Cytoplasmic tRNA 2-thiolation protein 1; TrEMBL-Plants: tr|G7J985|G7J985_MEDTR Cytoplasmic tRNA 2-thiolation protein 1; Found in the gene: LotjaGi1g1v0556900
GO terms
3
LotjaGi1g1v0556900.2
– Cytoplasmic tRNA 2-thiolation protein; TAIR: AT2G44270.1 repressor of lrx1; Swiss-Prot: sp|O64862|CTU1_ARATH Cytoplasmic tRNA 2-thiolation protein 1; TrEMBL-Plants: tr|V7AXH9|V7AXH9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0556900
GO terms
3
LotjaGi1g1v0556900.3
– Cytoplasmic tRNA 2-thiolation protein; TAIR: AT2G44270.1 repressor of lrx1; Swiss-Prot: sp|O64862|CTU1_ARATH Cytoplasmic tRNA 2-thiolation protein 1; TrEMBL-Plants: tr|G7J985|G7J985_MEDTR Cytoplasmic tRNA 2-thiolation protein 1; Found in the gene: LotjaGi1g1v0556900
GO terms
3
LotjaGi1g1v0556900.4
– Cytoplasmic tRNA 2-thiolation protein; TAIR: AT2G44270.1 repressor of lrx1; Swiss-Prot: sp|O64862|CTU1_ARATH Cytoplasmic tRNA 2-thiolation protein 1; TrEMBL-Plants: tr|G7J985|G7J985_MEDTR Cytoplasmic tRNA 2-thiolation protein 1; Found in the gene: LotjaGi1g1v0556900
GO terms
3
LotjaGi1g1v0596800.1
– Elongator complex protein 6; TAIR: AT4G10090.1 elongator protein 6; Swiss-Prot: sp|Q8L9Y2|ELP6_ARATH Elongator complex protein 6; TrEMBL-Plants: tr|C6TH84|C6TH84_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0596800
GO terms
2
LotjaGi1g1v0673000.1
– Cytoplasmic tRNA 2-thiolation protein 2; TAIR: AT4G35910.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|O65628|CTU2_ARATH Cytoplasmic tRNA 2-thiolation protein 2; TrEMBL-Plants: tr|A0A072U1R0|A0A072U1R0_MEDTR Cytoplasmic tRNA 2-thiolation protein 2; Found in the gene: LotjaGi1g1v0673000
GO terms
3
LotjaGi2g1v0084000_LC.1
– Elongator complex protein 4; TAIR: AT3G11220.1 Paxneb protein-like protein; Swiss-Prot: sp|Q9C778|ELP4_ARATH Elongator complex protein 4; TrEMBL-Plants: tr|A0A072TM62|A0A072TM62_MEDTR Elongator complex protein; Found in the gene: LotjaGi2g1v0084000_LC
GO terms
2
LotjaGi3g1v0068800.1
– Elongator complex protein 4; TAIR: AT3G11220.1 Paxneb protein-like protein; Swiss-Prot: sp|Q9C778|ELP4_ARATH Elongator complex protein 4; TrEMBL-Plants: tr|A0A072TKF7|A0A072TKF7_MEDTR Elongator complex protein; Found in the gene: LotjaGi3g1v0068800
GO terms
2
LotjaGi3g1v0068800.2
– Elongator complex protein 4; TAIR: AT3G11220.1 Paxneb protein-like protein; Swiss-Prot: sp|Q9C778|ELP4_ARATH Elongator complex protein 4; TrEMBL-Plants: tr|A0A072TKF7|A0A072TKF7_MEDTR Elongator complex protein; Found in the gene: LotjaGi3g1v0068800
GO terms
2
LotjaGi3g1v0068800.3
– Elongator complex protein 4; TAIR: AT3G11220.1 Paxneb protein-like protein; Swiss-Prot: sp|Q9C778|ELP4_ARATH Elongator complex protein 4; TrEMBL-Plants: tr|A0A072TKF7|A0A072TKF7_MEDTR Elongator complex protein; Found in the gene: LotjaGi3g1v0068800
GO terms
2
LotjaGi4g1v0410800.1
– TRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; TAIR: AT2G13440.1 glucose-inhibited division family A protein; Swiss-Prot: sp|Q55694|MNMG_SYNY3 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; TrEMBL-Plants: tr|I1K513|I1K513_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0410800
GO terms
1
LotjaGi4g1v0410800.2
– TRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; TAIR: AT2G13440.1 glucose-inhibited division family A protein; Swiss-Prot: sp|Q55694|MNMG_SYNY3 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; TrEMBL-Plants: tr|I1K513|I1K513_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0410800
GO terms
1
LotjaGi4g1v0410800.3
– TRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; TAIR: AT2G13440.1 glucose-inhibited division family A protein; Swiss-Prot: sp|Q55694|MNMG_SYNY3 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; TrEMBL-Plants: tr|I1K513|I1K513_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0410800
GO terms
1
LotjaGi5g1v0355700_LC.1
– Elongator complex protein 1; TAIR: AT5G13680.1 IKI3 family protein; Swiss-Prot: sp|Q9FNA4|ELP1_ARATH Elongator complex protein 1; TrEMBL-Plants: tr|A0A072VRS1|A0A072VRS1_MEDTR Elongator complex protein 1; Found in the gene: LotjaGi5g1v0355700_LC
GO terms
2
LotjaGi5g1v0355700_LC.10
– Elongator complex protein 1; TAIR: AT5G13680.1 IKI3 family protein; Swiss-Prot: sp|Q9FNA4|ELP1_ARATH Elongator complex protein 1; TrEMBL-Plants: tr|A0A072VSS4|A0A072VSS4_MEDTR Elongator complex protein 1; Found in the gene: LotjaGi5g1v0355700_LC
GO terms
2
LotjaGi5g1v0355700_LC.11
– Elongator complex protein 1; TAIR: AT5G13680.1 IKI3 family protein; Swiss-Prot: sp|Q9FNA4|ELP1_ARATH Elongator complex protein 1; TrEMBL-Plants: tr|A0A072VRS1|A0A072VRS1_MEDTR Elongator complex protein 1; Found in the gene: LotjaGi5g1v0355700_LC
GO terms
2
LotjaGi5g1v0355700_LC.12
– Elongator complex protein 1; TAIR: AT5G13680.1 IKI3 family protein; Swiss-Prot: sp|Q9FNA4|ELP1_ARATH Elongator complex protein 1; TrEMBL-Plants: tr|A0A072VRS1|A0A072VRS1_MEDTR Elongator complex protein 1; Found in the gene: LotjaGi5g1v0355700_LC
GO terms
2
LotjaGi5g1v0355700_LC.13
– Elongator complex protein 1; TAIR: AT5G13680.1 IKI3 family protein; Swiss-Prot: sp|Q9FNA4|ELP1_ARATH Elongator complex protein 1; TrEMBL-Plants: tr|V7BCU8|V7BCU8_PHAVU Elongator complex protein 1; Found in the gene: LotjaGi5g1v0355700_LC
GO terms
2
LotjaGi5g1v0355700_LC.14
– Elongator complex protein 1; TAIR: AT5G13680.1 IKI3 family protein; Swiss-Prot: sp|Q9FNA4|ELP1_ARATH Elongator complex protein 1; TrEMBL-Plants: tr|A0A072VRS1|A0A072VRS1_MEDTR Elongator complex protein 1; Found in the gene: LotjaGi5g1v0355700_LC
GO terms
2
LotjaGi5g1v0355700_LC.15
– Elongator complex protein 1; TAIR: AT5G13680.1 IKI3 family protein; Swiss-Prot: sp|Q9FNA4|ELP1_ARATH Elongator complex protein 1; TrEMBL-Plants: tr|A0A072VRS1|A0A072VRS1_MEDTR Elongator complex protein 1; Found in the gene: LotjaGi5g1v0355700_LC
GO terms
2
LotjaGi5g1v0355700_LC.16
– Elongator complex protein 1; TAIR: AT5G13680.1 IKI3 family protein; Swiss-Prot: sp|Q9FNA4|ELP1_ARATH Elongator complex protein 1; TrEMBL-Plants: tr|A0A072VRS1|A0A072VRS1_MEDTR Elongator complex protein 1; Found in the gene: LotjaGi5g1v0355700_LC
GO terms
2
LotjaGi5g1v0355700_LC.2
– Elongator complex protein 1; TAIR: AT5G13680.1 IKI3 family protein; Swiss-Prot: sp|Q9FNA4|ELP1_ARATH Elongator complex protein 1; TrEMBL-Plants: tr|A0A072VRS1|A0A072VRS1_MEDTR Elongator complex protein 1; Found in the gene: LotjaGi5g1v0355700_LC
GO terms
2
LotjaGi5g1v0355700_LC.3
– Elongator complex protein 1; TAIR: AT5G13680.1 IKI3 family protein; Swiss-Prot: sp|Q9FNA4|ELP1_ARATH Elongator complex protein 1; TrEMBL-Plants: tr|A0A072VSS4|A0A072VSS4_MEDTR Elongator complex protein 1; Found in the gene: LotjaGi5g1v0355700_LC
GO terms
2
LotjaGi5g1v0355700_LC.4
– Elongator complex protein 1; TAIR: AT5G13680.1 IKI3 family protein; Swiss-Prot: sp|Q9FNA4|ELP1_ARATH Elongator complex protein 1; TrEMBL-Plants: tr|A0A072VRS1|A0A072VRS1_MEDTR Elongator complex protein 1; Found in the gene: LotjaGi5g1v0355700_LC
GO terms
2
LotjaGi5g1v0355700_LC.5
– Elongator complex protein 1; TAIR: AT5G13680.1 IKI3 family protein; Swiss-Prot: sp|Q9FNA4|ELP1_ARATH Elongator complex protein 1; TrEMBL-Plants: tr|A0A072VRS1|A0A072VRS1_MEDTR Elongator complex protein 1; Found in the gene: LotjaGi5g1v0355700_LC
GO terms
2
LotjaGi5g1v0355700_LC.6
– Elongator complex protein 1; TAIR: AT5G13680.1 IKI3 family protein; Swiss-Prot: sp|Q9FNA4|ELP1_ARATH Elongator complex protein 1; TrEMBL-Plants: tr|A0A072VRS1|A0A072VRS1_MEDTR Elongator complex protein 1; Found in the gene: LotjaGi5g1v0355700_LC
GO terms
2
LotjaGi5g1v0355700_LC.7
– Elongator complex protein 1; TAIR: AT5G13680.1 IKI3 family protein; Swiss-Prot: sp|Q9FNA4|ELP1_ARATH Elongator complex protein 1; TrEMBL-Plants: tr|A0A072VRS1|A0A072VRS1_MEDTR Elongator complex protein 1; Found in the gene: LotjaGi5g1v0355700_LC
GO terms
2
LotjaGi5g1v0355700_LC.8
– Elongator complex protein 1; TAIR: AT5G13680.1 IKI3 family protein; Swiss-Prot: sp|Q9FNA4|ELP1_ARATH Elongator complex protein 1; TrEMBL-Plants: tr|A0A072VRS1|A0A072VRS1_MEDTR Elongator complex protein 1; Found in the gene: LotjaGi5g1v0355700_LC
GO terms
2
LotjaGi5g1v0355700_LC.9
– Elongator complex protein 1; TAIR: AT5G13680.1 IKI3 family protein; Swiss-Prot: sp|Q9FNA4|ELP1_ARATH Elongator complex protein 1; TrEMBL-Plants: tr|V7BCU8|V7BCU8_PHAVU Elongator complex protein 1; Found in the gene: LotjaGi5g1v0355700_LC
GO terms
2
LotjaGi6g1v0074700.1
– Elongator complex protein 4; TAIR: AT3G11220.1 Paxneb protein-like protein; Swiss-Prot: sp|Q9C778|ELP4_ARATH Elongator complex protein 4; TrEMBL-Plants: tr|I1LXN7|I1LXN7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0074700
GO terms
2

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0033588
Cellular component Elongator holoenzyme complex 1 2.08