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Lj2g3v2291670.1

Overview

Field Value
Gene ID Lj2g3v2291670
Transcript ID Lj2g3v2291670.1
Lotus japonicus genome version MG20 v3.0
Description RecName: Full=Asparagine synthetase [glutamine]-hydrolyzing] gi|1351983|sp|P49092.2|ASNS1_LOTJA
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
SIGNAL_PEPTIDE
1 16 16 – –
SUPERFAMILY
SSF56235
1 195 195 3.43E-52
IPR029055
Phobius
SIGNAL_PEPTIDE_N_REGION
1 1 1 – –
ProSiteProfiles
PS51278
2 185 184 34.154
IPR017932
Gene3D
G3DSA:3.60.20.10
2 189 188 3.70E-59
IPR029055
Phobius
SIGNAL_PEPTIDE_H_REGION
2 10 9 – –
CDD
cd00712
2 192 191 7.71E-69
IPR033738
PANTHER
PTHR11772:SF13
2 538 537 0 –
PANTHER
PTHR11772
2 538 537 0 –
TIGRFAM
TIGR01536
2 370 369 1.80E-101
IPR006426
Phobius
SIGNAL_PEPTIDE_C_REGION
11 16 6 – –
Phobius
NON_CYTOPLASMIC_DOMAIN
17 586 570 – –
Pfam
PF13537
48 165 118 1.70E-36
IPR017932
Gene3D
G3DSA:3.40.50.620
190 510 321 6.40E-117
IPR014729
SUPERFAMILY
SSF52402
200 480 281 1.86E-74 –
Pfam
PF00733
210 361 152 2.30E-56
IPR001962
CDD
cd01991
211 456 246 3.32E-76
IPR001962

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004066
Molecular function Asparagine synthase (glutamine-hydrolyzing) activity Catalysis of the reaction: ATP + L-aspartate + L-glutamine = AMP + diphosphate + L-asparagine + L-glutamate.
Subterm of
GO:0006529
Biological process Asparagine biosynthetic process The chemical reactions and pathways resulting in the formation of asparagine, 2-amino-3-carbamoylpropanoic acid.
Subterm of

Genome browser

LORE1 insertions 22

Expression data

Expression pattern

Expression pattern of Lj2g3v2291670.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v2291670.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.