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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

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  • IPR006426
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We have found 19 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.196s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0361789.1
n.a. Asparagine synthetase [Medicago truncatula] gi|357463343|ref|XP_003601953.1| chr0 190606381 190612311 -
2 domain predictions
2 GO terms
Lj2g3v2291670.1
n.a. RecName: Full=Asparagine synthetase [glutamine]-hydrolyzing] gi|1351983|sp|P49092.2|ASNS1_LOTJA chr2 33348035 33353661 -
2 domain predictions
2 GO terms
LotjaGi1g1v0118200.1
n.a. Asparagine synthetase; TAIR: AT3G47340.1 glutamine-dependent asparagine synthase 1; Swiss-Prot: sp|P49092|ASNS1_LOTJA Asparagine synthetase [glutamine]-hydrolyzing] 1; TrEMBL-Plants: tr|Q8RVL0|Q8RVL0_9FABA Asparagine synthetase; Found in the gene: LotjaGi1g1v0118200 LjG1.1_chr1 18678532 18684194 +
3 domain predictions
2 GO terms
LotjaGi1g1v0118200.2
n.a. Asparagine synthetase; TAIR: AT3G47340.1 glutamine-dependent asparagine synthase 1; Swiss-Prot: sp|P49092|ASNS1_LOTJA Asparagine synthetase [glutamine]-hydrolyzing] 1; TrEMBL-Plants: tr|Q8RVL0|Q8RVL0_9FABA Asparagine synthetase; Found in the gene: LotjaGi1g1v0118200 LjG1.1_chr1 18678581 18685507 +
3 domain predictions
2 GO terms
LotjaGi1g1v0118200.3
n.a. Asparagine synthetase; TAIR: AT3G47340.3 glutamine-dependent asparagine synthase 1; Swiss-Prot: sp|P49092|ASNS1_LOTJA Asparagine synthetase [glutamine]-hydrolyzing] 1; TrEMBL-Plants: tr|Q8RVL0|Q8RVL0_9FABA Asparagine synthetase; Found in the gene: LotjaGi1g1v0118200 LjG1.1_chr1 18678780 18683123 +
2 domain predictions
2 GO terms
LotjaGi1g1v0118200.4
n.a. Asparagine synthetase; TAIR: AT3G47340.1 glutamine-dependent asparagine synthase 1; Swiss-Prot: sp|P49092|ASNS1_LOTJA Asparagine synthetase [glutamine]-hydrolyzing] 1; TrEMBL-Plants: tr|Q8RVL0|Q8RVL0_9FABA Asparagine synthetase; Found in the gene: LotjaGi1g1v0118200 LjG1.1_chr1 18678780 18683548 +
3 domain predictions
2 GO terms
LotjaGi1g1v0118200.5
n.a. Asparagine synthetase; TAIR: AT3G47340.1 glutamine-dependent asparagine synthase 1; Swiss-Prot: sp|P49092|ASNS1_LOTJA Asparagine synthetase [glutamine]-hydrolyzing] 1; TrEMBL-Plants: tr|Q8RVL0|Q8RVL0_9FABA Asparagine synthetase; Found in the gene: LotjaGi1g1v0118200 LjG1.1_chr1 18678780 18684194 +
2 domain predictions
2 GO terms
LotjaGi1g1v0118200.6
n.a. Asparagine synthetase; TAIR: AT3G47340.1 glutamine-dependent asparagine synthase 1; Swiss-Prot: sp|P49092|ASNS1_LOTJA Asparagine synthetase [glutamine]-hydrolyzing] 1; TrEMBL-Plants: tr|Q8RVL0|Q8RVL0_9FABA Asparagine synthetase; Found in the gene: LotjaGi1g1v0118200 LjG1.1_chr1 18679453 18684194 +
2 domain predictions
2 GO terms
LotjaGi6g1v0088100.1
n.a. Asparagine synthetase, putative; TAIR: AT5G10240.1 asparagine synthetase 3; Swiss-Prot: sp|Q9LFU1|ASNS3_ARATH Asparagine synthetase [glutamine]-hydrolyzing] 3; TrEMBL-Plants: tr|G7J3R9|G7J3R9_MEDTR Asparagine synthetase [glutamine]-hydrolyzing] protein; Found in the gene: LotjaGi6g1v0088100 LjG1.1_chr6 17798176 17804573 -
3 domain predictions
2 GO terms
LotjaGi6g1v0088100.2
n.a. Asparagine synthetase, putative; TAIR: AT5G10240.1 asparagine synthetase 3; Swiss-Prot: sp|Q9LFU1|ASNS3_ARATH Asparagine synthetase [glutamine]-hydrolyzing] 3; TrEMBL-Plants: tr|G7J3R9|G7J3R9_MEDTR Asparagine synthetase [glutamine]-hydrolyzing] protein; Found in the gene: LotjaGi6g1v0088100 LjG1.1_chr6 17798452 17804268 -
3 domain predictions
2 GO terms
LotjaGi6g1v0088100.3
n.a. Asparagine synthetase, putative; TAIR: AT5G10240.1 asparagine synthetase 3; Swiss-Prot: sp|Q9LFU1|ASNS3_ARATH Asparagine synthetase [glutamine]-hydrolyzing] 3; TrEMBL-Plants: tr|G7J3R9|G7J3R9_MEDTR Asparagine synthetase [glutamine]-hydrolyzing] protein; Found in the gene: LotjaGi6g1v0088100 LjG1.1_chr6 17798465 17804573 -
2 domain predictions
2 GO terms
LotjaGi6g1v0088100.4
n.a. Asparagine synthetase, putative; TAIR: AT5G10240.1 asparagine synthetase 3; Swiss-Prot: sp|Q9LFU1|ASNS3_ARATH Asparagine synthetase [glutamine]-hydrolyzing] 3; TrEMBL-Plants: tr|Q14SM9|Q14SM9_SOYBN Asparagine synthetase, type III; Found in the gene: LotjaGi6g1v0088100 LjG1.1_chr6 17798465 17804573 -
2 domain predictions
2 GO terms
LotjaGi6g1v0088100.6
n.a. Asparagine synthetase, putative; TAIR: AT5G10240.1 asparagine synthetase 3; Swiss-Prot: sp|Q9LFU1|ASNS3_ARATH Asparagine synthetase [glutamine]-hydrolyzing] 3; TrEMBL-Plants: tr|Q14SM9|Q14SM9_SOYBN Asparagine synthetase, type III; Found in the gene: LotjaGi6g1v0088100 LjG1.1_chr6 17798480 17804268 -
2 domain predictions
2 GO terms
LotjaGi6g1v0088100.7
n.a. Asparagine synthetase, putative; TAIR: AT5G10240.1 asparagine synthetase 3; Swiss-Prot: sp|Q9LFU1|ASNS3_ARATH Asparagine synthetase [glutamine]-hydrolyzing] 3; TrEMBL-Plants: tr|G7J3R9|G7J3R9_MEDTR Asparagine synthetase [glutamine]-hydrolyzing] protein; Found in the gene: LotjaGi6g1v0088100 LjG1.1_chr6 17798480 17804568 -
3 domain predictions
2 GO terms
LotjaGi6g1v0088100.8
n.a. Asparagine synthetase, putative; TAIR: AT5G10240.1 asparagine synthetase 3; Swiss-Prot: sp|Q9LFU1|ASNS3_ARATH Asparagine synthetase [glutamine]-hydrolyzing] 3; TrEMBL-Plants: tr|Q14SM9|Q14SM9_SOYBN Asparagine synthetase, type III; Found in the gene: LotjaGi6g1v0088100 LjG1.1_chr6 17798493 17804268 -
2 domain predictions
2 GO terms
LotjaGi6g1v0130800.1
n.a. Asparagine synthetase; TAIR: AT3G47340.1 glutamine-dependent asparagine synthase 1; Swiss-Prot: sp|P49093|ASNS2_LOTJA Asparagine synthetase [glutamine]-hydrolyzing] 2; TrEMBL-Plants: tr|Q84X69|Q84X69_9FABA Asparagine synthetase; Found in the gene: LotjaGi6g1v0130800 LjG1.1_chr6 36808984 36813315 +
3 domain predictions
2 GO terms
LotjaGi6g1v0130800.3
n.a. Asparagine synthetase; TAIR: AT3G47340.1 glutamine-dependent asparagine synthase 1; Swiss-Prot: sp|P49093|ASNS2_LOTJA Asparagine synthetase [glutamine]-hydrolyzing] 2; TrEMBL-Plants: tr|Q84X69|Q84X69_9FABA Asparagine synthetase; Found in the gene: LotjaGi6g1v0130800 LjG1.1_chr6 36809058 36813677 +
3 domain predictions
2 GO terms
LotjaGi6g1v0130800.4
n.a. Asparagine synthetase; TAIR: AT3G47340.1 glutamine-dependent asparagine synthase 1; Swiss-Prot: sp|P49093|ASNS2_LOTJA Asparagine synthetase [glutamine]-hydrolyzing] 2; TrEMBL-Plants: tr|Q84X69|Q84X69_9FABA Asparagine synthetase; Found in the gene: LotjaGi6g1v0130800 LjG1.1_chr6 36809217 36813043 +
3 domain predictions
2 GO terms
LotjaGi6g1v0130800.5
n.a. Asparagine synthetase; TAIR: AT3G47340.1 glutamine-dependent asparagine synthase 1; Swiss-Prot: sp|P49093|ASNS2_LOTJA Asparagine synthetase [glutamine]-hydrolyzing] 2; TrEMBL-Plants: tr|Q84X69|Q84X69_9FABA Asparagine synthetase; Found in the gene: LotjaGi6g1v0130800 LjG1.1_chr6 36809217 36813315 +
3 domain predictions
2 GO terms