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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2293750 |
| Transcript ID | Lj2g3v2293750.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: MATE efflux family protein 3, chloroplastic-like [Cicer arietinum] gi|502100116|ref|XP_004491639.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | 1 | 432 | 432 | 2.28E-87 | – | |
| Phobius | 1 | 96 | 96 | – | – | |
| PANTHER | 1 | 70 | 70 | 1.20E-295 | – | |
| PANTHER | 1 | 70 | 70 | 1.20E-295 | – | |
| TIGRFAM | 5 | 412 | 408 | 3.60E-78 | ||
| TMHMM | 23 | 45 | 23 | – | – | |
| PANTHER | 88 | 445 | 358 | 1.20E-295 | – | |
| PANTHER | 88 | 445 | 358 | 1.20E-295 | – | |
| Pfam | 93 | 181 | 89 | 8.50E-09 | ||
| Phobius | 97 | 123 | 27 | – | – | |
| TMHMM | 98 | 120 | 23 | – | – | |
| Phobius | 124 | 142 | 19 | – | – | |
| TMHMM | 140 | 162 | 23 | – | – | |
| Phobius | 143 | 162 | 20 | – | – | |
| Phobius | 163 | 168 | 6 | – | – | |
| TMHMM | 169 | 191 | 23 | – | – | |
| Phobius | 169 | 190 | 22 | – | – | |
| Phobius | 191 | 195 | 5 | – | – | |
| TMHMM | 195 | 217 | 23 | – | – | |
| Phobius | 196 | 214 | 19 | – | – | |
| Phobius | 215 | 234 | 20 | – | – | |
| Phobius | 235 | 255 | 21 | – | – | |
| TMHMM | 238 | 260 | 23 | – | – | |
| Pfam | 252 | 390 | 139 | 3.60E-11 | ||
| Phobius | 256 | 274 | 19 | – | – | |
| TMHMM | 275 | 297 | 23 | – | – | |
| Phobius | 275 | 297 | 23 | – | – | |
| Phobius | 298 | 317 | 20 | – | – | |
| TMHMM | 318 | 340 | 23 | – | – | |
| Phobius | 318 | 341 | 24 | – | – | |
| Phobius | 342 | 352 | 11 | – | – | |
| Phobius | 353 | 371 | 19 | – | – | |
| Phobius | 372 | 382 | 11 | – | – | |
| TMHMM | 381 | 403 | 23 | – | – | |
| Phobius | 383 | 401 | 19 | – | – | |
| Phobius | 402 | 406 | 5 | – | – | |
| Phobius | 407 | 425 | 19 | – | – | |
| TMHMM | 410 | 432 | 23 | – | – | |
| Phobius | 426 | 451 | 26 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v2293750.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2293750.1, powered by CORGI.
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