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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2560100 |
| Transcript ID | Lj2g3v2560100.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: nucleolar complex protein 4 homolog [Glycine max] gi|356501033|ref|XP_003519333.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 452 | 452 | 1.60E-153 | ||
| PANTHER | 1 | 452 | 452 | 1.60E-153 | – | |
| MobiDBLite | 1 | 21 | 21 | – | – | |
| Phobius | 1 | 334 | 334 | – | – | |
| SUPERFAMILY | 43 | 197 | 155 | 1.86E-06 | ||
| SUPERFAMILY | 307 | 419 | 113 | 1.86E-06 | ||
| Phobius | 335 | 356 | 22 | – | – | |
| Pfam | 340 | 445 | 106 | 2.80E-20 | ||
| Phobius | 357 | 409 | 53 | – | – | |
| Phobius | 410 | 430 | 21 | – | – | |
| Phobius | 431 | 452 | 22 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Ribosome biogenesis | A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis. |
Expression pattern of Lj2g3v2560100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2560100.1, powered by CORGI.
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