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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2703390 |
| Transcript ID | Lj2g3v2703390.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Aquaporin protein PIP11 [Medicago truncatula] gi|357461163|ref|XP_003600863.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 52 | 52 | – | – | |
| MobiDBLite | 1 | 39 | 39 | – | – | |
| PANTHER | 1 | 284 | 284 | 4.30E-211 | ||
| PANTHER | 1 | 284 | 284 | 4.30E-211 | – | |
| Gene3D | 26 | 282 | 257 | 3.80E-88 | ||
| SUPERFAMILY | 47 | 282 | 236 | 1.31E-63 | ||
| Pfam | 47 | 277 | 231 | 3.90E-80 | ||
| Phobius | 53 | 72 | 20 | – | – | |
| PRINTS | 55 | 74 | 20 | 7.30E-68 | ||
| CDD | 55 | 280 | 226 | 9.65E-76 | ||
| TMHMM | 56 | 78 | 23 | – | – | |
| TIGRFAM | 59 | 277 | 219 | 1.90E-66 | ||
| Phobius | 73 | 92 | 20 | – | – | |
| TMHMM | 93 | 115 | 23 | – | – | |
| Phobius | 93 | 116 | 24 | – | – | |
| PRINTS | 97 | 121 | 25 | 7.30E-68 | ||
| ProSitePatterns | 115 | 123 | 9 | – | ||
| Phobius | 117 | 135 | 19 | – | – | |
| PRINTS | 134 | 153 | 20 | 7.30E-68 | ||
| Phobius | 136 | 156 | 21 | – | – | |
| TMHMM | 136 | 153 | 18 | – | – | |
| Phobius | 157 | 212 | 56 | – | – | |
| TMHMM | 181 | 198 | 18 | – | – | |
| PRINTS | 184 | 202 | 19 | 7.30E-68 | ||
| TMHMM | 211 | 233 | 23 | – | – | |
| Phobius | 213 | 233 | 21 | – | – | |
| PRINTS | 220 | 242 | 23 | 7.30E-68 | ||
| Phobius | 234 | 259 | 26 | – | – | |
| TMHMM | 259 | 281 | 23 | – | – | |
| PRINTS | 260 | 280 | 21 | 7.30E-68 | ||
| Phobius | 260 | 281 | 22 | – | – | |
| Phobius | 282 | 289 | 8 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Channel activity | Enables the energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v2703390.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2703390.1, powered by CORGI.
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