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| Field | Value |
|---|---|
| Gene ID | Lj2g3v3152930 |
| Transcript ID | Lj2g3v3152930.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Peptide methionine sulfoxide reductase [Medicago truncatula] gi|357459589|ref|XP_003600075.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 201 | 201 | 2.20E-149 | – | |
| MobiDBLite | 1 | 28 | 28 | – | – | |
| PANTHER | 1 | 201 | 201 | 2.20E-149 | ||
| Gene3D | 20 | 181 | 162 | 1.80E-70 | ||
| SUPERFAMILY | 30 | 182 | 153 | 1.96E-69 | ||
| Hamap | 35 | 192 | 158 | 34.528 | ||
| TIGRFAM | 38 | 181 | 144 | 1.30E-61 | ||
| Pfam | 39 | 180 | 142 | 1.20E-61 | ||
| MobiDBLite | 182 | 202 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Response to oxidative stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals. | ||
| Molecular function | Peptide-methionine (S)-S-oxide reductase activity | Catalysis of the reactions: peptide-L-methionine + thioredoxin disulfide + H2O = peptide-L-methionine (S)-S-oxide + thioredoxin, and L-methionine + thioredoxin disulfide + H2O = L-methionine (S)-S-oxide + thioredoxin. Can act on oxidized methionine in peptide linkage with specificity for the S enantiomer. Thioredoxin disulfide is the oxidized form of thioredoxin. | ||
| Molecular function | Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces disulfide. | ||
| Biological process | Protein repair | The process of restoring a protein to its original state after damage by such things as oxidation or spontaneous decomposition of residues. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj2g3v3152930.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v3152930.1, powered by CORGI.
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