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| Field | Value |
|---|---|
| Gene ID | Lj2g3v3224410 |
| Transcript ID | Lj2g3v3224410.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: fimbrin-1-like [Glycine max] gi|356501590|ref|XP_003519607.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 654 | 654 | 0 | – | |
| PANTHER | 1 | 654 | 654 | 0 | – | |
| Gene3D | 116 | 227 | 112 | 5.00E-27 | ||
| SUPERFAMILY | 120 | 618 | 499 | 4.32E-166 | ||
| ProSiteProfiles | 122 | 239 | 118 | 14.112 | ||
| SMART | 124 | 237 | 114 | 3.30E-17 | ||
| CDD | 130 | 237 | 108 | 6.52E-16 | ||
| Pfam | 149 | 237 | 89 | 1.40E-15 | ||
| Gene3D | 228 | 366 | 139 | 7.20E-33 | ||
| ProSiteProfiles | 267 | 370 | 104 | 16.976 | ||
| CDD | 268 | 368 | 101 | 6.21E-17 | ||
| Pfam | 268 | 369 | 102 | 1.50E-22 | ||
| SMART | 269 | 368 | 100 | 3.00E-22 | ||
| Gene3D | 385 | 485 | 101 | 1.20E-33 | ||
| ProSiteProfiles | 392 | 498 | 107 | 18.002 | ||
| SMART | 394 | 496 | 103 | 5.50E-27 | ||
| Pfam | 395 | 496 | 102 | 1.00E-19 | ||
| CDD | 401 | 495 | 95 | 9.03E-15 | ||
| ProSitePatterns | 470 | 494 | 25 | – | ||
| Gene3D | 486 | 617 | 132 | 2.00E-32 | ||
| ProSiteProfiles | 513 | 621 | 109 | 14.639 | ||
| SMART | 515 | 619 | 105 | 1.20E-14 | ||
| Pfam | 516 | 617 | 102 | 1.10E-16 | ||
| MobiDBLite | 627 | 688 | 62 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v3224410.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v3224410.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.