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cd00014

Source: CDD

Description

CH

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Associated Lotus transcripts 15

Transcript Name Description Predicted domains Domain count
Lj0g3v0087769.1
– Fimbrin [Medicago truncatula] gi|357513165|ref|XP_003626871.1|
Domains
12
Lj2g3v3224410.1
– PREDICTED: fimbrin-1-like [Glycine max] gi|356501590|ref|XP_003519607.1|
Domains
12
Lj2g3v3339470.1
– PREDICTED: fimbrin-like protein 2-like [Cicer arietinum] gi|502100001|ref|XP_004491610.1|
Domains
14
LotjaGi1g1v0005700.1
– Fimbrin-like protein 2; TAIR: AT5G35700.1 fimbrin-like protein 2; Swiss-Prot: sp|Q9FKI0|FIMB5_ARATH Fimbrin-5; TrEMBL-Plants: tr|G7K508|G7K508_MEDTR Actin-binding calponin-like (CH) domain protein; Found in the gene: LotjaGi1g1v0005700
Domains
16
LotjaGi1g1v0005700.2
– Fimbrin-like protein 2; TAIR: AT5G35700.1 fimbrin-like protein 2; Swiss-Prot: sp|Q9FKI0|FIMB5_ARATH Fimbrin-5; TrEMBL-Plants: tr|G7K508|G7K508_MEDTR Actin-binding calponin-like (CH) domain protein; Found in the gene: LotjaGi1g1v0005700
Domains
16
LotjaGi1g1v0005700.3
– Fimbrin-like protein 2; TAIR: AT5G35700.1 fimbrin-like protein 2; Swiss-Prot: sp|Q9FKI0|FIMB5_ARATH Fimbrin-5; TrEMBL-Plants: tr|G7K508|G7K508_MEDTR Actin-binding calponin-like (CH) domain protein; Found in the gene: LotjaGi1g1v0005700
Domains
16
LotjaGi1g1v0022300.1
– Fimbrin, putative; TAIR: AT4G26700.1 fimbrin 1; Swiss-Prot: sp|Q7G188|FIMB1_ARATH Fimbrin-1; TrEMBL-Plants: tr|K7KBJ8|K7KBJ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0022300
Domains
14
LotjaGi1g1v0022300.2
– Fimbrin, putative; TAIR: AT4G26700.1 fimbrin 1; Swiss-Prot: sp|Q7G188|FIMB1_ARATH Fimbrin-1; TrEMBL-Plants: tr|K7KBJ8|K7KBJ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0022300
Domains
14
LotjaGi1g1v0022300.3
– Fimbrin-like protein 2; TAIR: AT4G26700.7 fimbrin 1; Swiss-Prot: sp|Q9FJ70|FIMB3_ARATH Fimbrin-3; TrEMBL-Plants: tr|K7KBJ8|K7KBJ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0022300
Domains
14
LotjaGi3g1v0272800.1
– Fimbrin-like protein 2; TAIR: AT5G48460.1 Actin binding Calponin homology (CH) domain-containing protein; Swiss-Prot: sp|O50064|FIMB2_ARATH Fimbrin-2; TrEMBL-Plants: tr|G7LEC3|G7LEC3_MEDTR Actin-binding calponin-like (CH) domain protein; Found in the gene: LotjaGi3g1v0272800
Domains
15
LotjaGi3g1v0272800.2
– Fimbrin-like protein 2; TAIR: AT5G48460.1 Actin binding Calponin homology (CH) domain-containing protein; Swiss-Prot: sp|O50064|FIMB2_ARATH Fimbrin-2; TrEMBL-Plants: tr|G7LEC3|G7LEC3_MEDTR Actin-binding calponin-like (CH) domain protein; Found in the gene: LotjaGi3g1v0272800
Domains
15
LotjaGi3g1v0272800.3
– Fimbrin-like protein 2; TAIR: AT5G48460.1 Actin binding Calponin homology (CH) domain-containing protein; Swiss-Prot: sp|O50064|FIMB2_ARATH Fimbrin-2; TrEMBL-Plants: tr|G7LEC3|G7LEC3_MEDTR Actin-binding calponin-like (CH) domain protein; Found in the gene: LotjaGi3g1v0272800
Domains
14
LotjaGi3g1v0272800.4
– Fimbrin-like protein 2; TAIR: AT5G48460.1 Actin binding Calponin homology (CH) domain-containing protein; Swiss-Prot: sp|O50064|FIMB2_ARATH Fimbrin-2; TrEMBL-Plants: tr|G7LEC3|G7LEC3_MEDTR Actin-binding calponin-like (CH) domain protein; Found in the gene: LotjaGi3g1v0272800
Domains
15
LotjaGi3g1v0272800.5
– Fimbrin-like protein 2; TAIR: AT5G48460.1 Actin binding Calponin homology (CH) domain-containing protein; Swiss-Prot: sp|O50064|FIMB2_ARATH Fimbrin-2; TrEMBL-Plants: tr|G7LEC3|G7LEC3_MEDTR Actin-binding calponin-like (CH) domain protein; Found in the gene: LotjaGi3g1v0272800
Domains
15
LotjaGi3g1v0272800.6
– Fimbrin-like protein 2; TAIR: AT5G48460.1 Actin binding Calponin homology (CH) domain-containing protein; Swiss-Prot: sp|O50064|FIMB2_ARATH Fimbrin-2; TrEMBL-Plants: tr|G7LEC3|G7LEC3_MEDTR Actin-binding calponin-like (CH) domain protein; Found in the gene: LotjaGi3g1v0272800
Domains
15

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 6.67