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IPR001589 is a Actinin-type actin-binding domain, conserved site.
<p>Alpha-actinin is a F-actin cross-linking protein which is thought to anchor actin to a variety of intracellular structures [[cite:PUB00001105]]. The actin-binding domain of alpha-actinin seems to reside in the first 250 residues of the protein. A similar actin-binding domain has been found in the N-terminal region of many different actin-binding proteins [[cite:PUB00005381], [cite:PUB00000716]], like the beta chain of spectrin (or fodrin), dystrophin, the slime mold gelation factor (or ABP-120), filamin and fimbrin.</p> <p>This entry represents two conserved sites for the actin-binding domain.</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Fimbrin [Medicago truncatula] gi|357513165|ref|XP_003626871.1| | 12 | ||
| – | PREDICTED: fimbrin-1-like [Glycine max] gi|356501590|ref|XP_003519607.1| | 12 | ||
| – | Fimbrin, putative; TAIR: AT4G26700.1 fimbrin 1; Swiss-Prot: sp|Q7G188|FIMB1_ARATH Fimbrin-1; TrEMBL-Plants: tr|K7KBJ8|K7KBJ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0022300 | 14 | ||
| – | Fimbrin, putative; TAIR: AT4G26700.1 fimbrin 1; Swiss-Prot: sp|Q7G188|FIMB1_ARATH Fimbrin-1; TrEMBL-Plants: tr|K7KBJ8|K7KBJ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0022300 | 14 | ||
| – | Fimbrin-like protein 2; TAIR: AT4G26700.7 fimbrin 1; Swiss-Prot: sp|Q9FJ70|FIMB3_ARATH Fimbrin-3; TrEMBL-Plants: tr|K7KBJ8|K7KBJ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0022300 | 14 | ||
| – | Fimbrin-like protein 2; TAIR: AT5G48460.1 Actin binding Calponin homology (CH) domain-containing protein; Swiss-Prot: sp|O50064|FIMB2_ARATH Fimbrin-2; TrEMBL-Plants: tr|G7LEC3|G7LEC3_MEDTR Actin-binding calponin-like (CH) domain protein; Found in the gene: LotjaGi3g1v0272800 | 15 | ||
| – | Fimbrin-like protein 2; TAIR: AT5G48460.1 Actin binding Calponin homology (CH) domain-containing protein; Swiss-Prot: sp|O50064|FIMB2_ARATH Fimbrin-2; TrEMBL-Plants: tr|G7LEC3|G7LEC3_MEDTR Actin-binding calponin-like (CH) domain protein; Found in the gene: LotjaGi3g1v0272800 | 15 | ||
| – | Fimbrin-like protein 2; TAIR: AT5G48460.1 Actin binding Calponin homology (CH) domain-containing protein; Swiss-Prot: sp|O50064|FIMB2_ARATH Fimbrin-2; TrEMBL-Plants: tr|G7LEC3|G7LEC3_MEDTR Actin-binding calponin-like (CH) domain protein; Found in the gene: LotjaGi3g1v0272800 | 14 | ||
| – | Fimbrin-like protein 2; TAIR: AT5G48460.1 Actin binding Calponin homology (CH) domain-containing protein; Swiss-Prot: sp|O50064|FIMB2_ARATH Fimbrin-2; TrEMBL-Plants: tr|G7LEC3|G7LEC3_MEDTR Actin-binding calponin-like (CH) domain protein; Found in the gene: LotjaGi3g1v0272800 | 15 | ||
| – | Fimbrin-like protein 2; TAIR: AT5G48460.1 Actin binding Calponin homology (CH) domain-containing protein; Swiss-Prot: sp|O50064|FIMB2_ARATH Fimbrin-2; TrEMBL-Plants: tr|G7LEC3|G7LEC3_MEDTR Actin-binding calponin-like (CH) domain protein; Found in the gene: LotjaGi3g1v0272800 | 15 | ||
| – | Fimbrin-like protein 2; TAIR: AT5G48460.1 Actin binding Calponin homology (CH) domain-containing protein; Swiss-Prot: sp|O50064|FIMB2_ARATH Fimbrin-2; TrEMBL-Plants: tr|G7LEC3|G7LEC3_MEDTR Actin-binding calponin-like (CH) domain protein; Found in the gene: LotjaGi3g1v0272800 | 15 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 9.09 |