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Lj2g3v3245770.1

Overview

Field Value
Gene ID Lj2g3v3245770
Transcript ID Lj2g3v3245770.1
Lotus japonicus genome version MG20 v3.0
Description Ripening-related protein-like hydrolase-like protein [Medicago truncatula] gi|357472811|ref|XP_003606690.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR12725:SF72
1 147 147 1.80E-158 –
PANTHER
PTHR12725
1 147 147 1.80E-158 –
Gene3D
G3DSA:3.40.50.1000
10 148 139 2.40E-27
IPR023214
TIGRFAM
TIGR01993
12 236 225 5.80E-65
IPR010237
SUPERFAMILY
SSF56784
13 147 135 1.73E-27
IPR023214
CDD
cd01427
115 237 123 3.29E-08 –
TIGRFAM
TIGR01509
182 237 56 5.60E-13
IPR006439
PANTHER
PTHR12725:SF72
191 285 95 1.80E-158 –
PANTHER
PTHR12725
191 285 95 1.80E-158 –
SUPERFAMILY
SSF56784
192 241 50 1.73E-27
IPR023214
Gene3D
G3DSA:3.40.50.1000
193 257 65 2.40E-27
IPR023214

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016787
Molecular function Hydrolase activity Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
Subterm of

Genome browser

LORE1 insertions 3

Expression data

Expression pattern

Expression pattern of Lj2g3v3245770.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v3245770.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.