Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj2g3v3337750.1

Overview

Field Value
Gene ID Lj2g3v3337750
Transcript ID Lj2g3v3337750.1
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description Heat-shock protein [Medicago truncatula] gi|357495325|ref|XP_003617951.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11528:SF41
37 635 599 0 –
PANTHER
PTHR11528
37 635 599 0
IPR001404
PIRSF
PIRSF002583
65 663 599 3.80E-165
IPR001404
PRINTS
PR00775
99 119 21 1.70E-50
IPR020575
SUPERFAMILY
SSF55874
99 313 215 2.22E-50
IPR003594
Gene3D
G3DSA:3.30.565.10
99 309 211 5.50E-64
IPR003594
PRINTS
PR00775
120 142 23 1.70E-50
IPR020575
CDD
cd00075
125 232 108 1.73E-05 –
Pfam
PF13589
127 255 129 5.00E-09 –
PRINTS
PR00775
169 186 18 1.70E-50
IPR020575
PRINTS
PR00775
187 204 18 1.70E-50
IPR020575
PRINTS
PR00775
216 238 23 1.70E-50
IPR020575
PRINTS
PR00775
271 288 18 1.70E-50
IPR020575
Pfam
PF00183
286 640 355 2.30E-97
IPR001404
PRINTS
PR00775
289 307 19 1.70E-50
IPR020575
Gene3D
G3DSA:3.30.565.10
346 359 14 5.50E-64
IPR003594
SUPERFAMILY
SSF54211
353 625 273 1.52E-67
IPR020568

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006457
Biological process Protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
Subterm of
GO:0051082
Molecular function Unfolded protein binding Interacting selectively and non-covalently with an unfolded protein.
Subterm of

Genome browser

LORE1 insertions 13

Expression data

Expression pattern

Expression pattern of Lj2g3v3337750.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v3337750.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.