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| Field | Value |
|---|---|
| Gene ID | Lj2g3v3339150 |
| Transcript ID | Lj2g3v3339150.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Periodic tryptophan protein-like protein [Medicago truncatula] gi|357495421|ref|XP_003617999.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 486 | 486 | 4.70E-233 | – | |
| MobiDBLite | 38 | 59 | 22 | – | – | |
| Gene3D | 189 | 476 | 288 | 1.90E-50 | ||
| SUPERFAMILY | 203 | 473 | 271 | 1.14E-46 | ||
| PRINTS | 207 | 221 | 15 | 2.50E-07 | ||
| SMART | 245 | 287 | 43 | 6.00E-06 | ||
| ProSiteProfiles | 254 | 481 | 228 | 30.031 | ||
| ProSiteProfiles | 254 | 288 | 35 | 12.213 | ||
| Pfam | 256 | 287 | 32 | 0.003 | ||
| ProSitePatterns | 274 | 288 | 15 | – | ||
| PRINTS | 274 | 288 | 15 | 2.50E-07 | ||
| SMART | 290 | 330 | 41 | 9.00E-04 | ||
| SMART | 334 | 373 | 40 | 2.4 | ||
| SMART | 387 | 427 | 41 | 1.80E-10 | ||
| Pfam | 392 | 427 | 36 | 7.50E-07 | ||
| ProSiteProfiles | 394 | 436 | 43 | 15.956 | ||
| ProSitePatterns | 414 | 428 | 15 | – | ||
| PRINTS | 414 | 428 | 15 | 2.50E-07 | ||
| SMART | 432 | 472 | 41 | 0.83 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v3339150.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v3339150.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.