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| Field | Value |
|---|---|
| Gene ID | Lj2g3v3339750 |
| Transcript ID | Lj2g3v3339750.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: transmembrane 9 superfamily member 4-like [Glycine max] gi|356501751|ref|XP_003519687.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 172 | 172 | 2.10E-154 | ||
| Pfam | 1 | 124 | 124 | 4.50E-50 | ||
| Phobius | 1 | 28 | 28 | – | – | |
| PANTHER | 1 | 172 | 172 | 2.10E-154 | – | |
| Phobius | 29 | 55 | 27 | – | – | |
| TMHMM | 29 | 51 | 23 | – | – | |
| Phobius | 56 | 60 | 5 | – | – | |
| TMHMM | 61 | 83 | 23 | – | – | |
| Phobius | 61 | 84 | 24 | – | – | |
| Phobius | 85 | 95 | 11 | – | – | |
| TMHMM | 96 | 118 | 23 | – | – | |
| Phobius | 96 | 121 | 26 | – | – | |
| Phobius | 122 | 132 | 11 | – | – | |
| Phobius | 133 | 166 | 34 | – | – | |
| TMHMM | 140 | 162 | 23 | – | – | |
| Phobius | 167 | 172 | 6 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj2g3v3339750.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v3339750.1, powered by CORGI.
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