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| Field | Value |
|---|---|
| Gene ID | Lj2g3v3372950 |
| Transcript ID | Lj2g3v3372950.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: MATE efflux family protein 3, chloroplastic-like [Cicer arietinum] gi|502100116|ref|XP_004491639.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 212 | 212 | – | – | |
| MobiDBLite | 73 | 104 | 32 | – | – | |
| PANTHER | 86 | 186 | 101 | 0 | – | |
| PANTHER | 86 | 186 | 101 | 0 | – | |
| CDD | 113 | 548 | 436 | 1.29E-98 | – | |
| Pfam | 121 | 297 | 177 | 6.60E-08 | ||
| TIGRFAM | 121 | 528 | 408 | 4.50E-78 | ||
| PANTHER | 204 | 561 | 358 | 0 | – | |
| PANTHER | 204 | 561 | 358 | 0 | – | |
| Phobius | 213 | 239 | 27 | – | – | |
| TMHMM | 214 | 236 | 23 | – | – | |
| Phobius | 240 | 258 | 19 | – | – | |
| TMHMM | 256 | 278 | 23 | – | – | |
| Phobius | 259 | 278 | 20 | – | – | |
| Phobius | 279 | 284 | 6 | – | – | |
| TMHMM | 285 | 307 | 23 | – | – | |
| Phobius | 285 | 306 | 22 | – | – | |
| Phobius | 307 | 311 | 5 | – | – | |
| TMHMM | 311 | 333 | 23 | – | – | |
| Phobius | 312 | 330 | 19 | – | – | |
| Phobius | 331 | 350 | 20 | – | – | |
| Phobius | 351 | 371 | 21 | – | – | |
| TMHMM | 354 | 376 | 23 | – | – | |
| Pfam | 368 | 506 | 139 | 6.30E-11 | ||
| Phobius | 372 | 390 | 19 | – | – | |
| Phobius | 391 | 413 | 23 | – | – | |
| TMHMM | 391 | 413 | 23 | – | – | |
| Phobius | 414 | 433 | 20 | – | – | |
| TMHMM | 434 | 456 | 23 | – | – | |
| Phobius | 434 | 457 | 24 | – | – | |
| Phobius | 458 | 468 | 11 | – | – | |
| Phobius | 469 | 487 | 19 | – | – | |
| Phobius | 488 | 498 | 11 | – | – | |
| TMHMM | 497 | 519 | 23 | – | – | |
| Phobius | 499 | 517 | 19 | – | – | |
| Phobius | 518 | 522 | 5 | – | – | |
| Phobius | 523 | 541 | 19 | – | – | |
| TMHMM | 526 | 548 | 23 | – | – | |
| Phobius | 542 | 572 | 31 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v3372950.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v3372950.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.