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| Field | Value |
|---|---|
| Gene ID | Lj2g3v3403240 |
| Transcript ID | Lj2g3v3403240.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: glutamate receptor 3.2-like [Glycine max] gi|356553421|ref|XP_003545055.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 69 | 69 | – | – | |
| Phobius | 70 | 88 | 19 | – | – | |
| PANTHER | 72 | 703 | 632 | 0 | – | |
| PANTHER | 72 | 703 | 632 | 0 | – | |
| Phobius | 89 | 663 | 575 | – | – | |
| SUPERFAMILY | 102 | 490 | 389 | 1.75E-78 | ||
| Gene3D | 102 | 218 | 117 | 1.60E-22 | – | |
| CDD | 104 | 498 | 395 | 1.10E-117 | – | |
| Pfam | 121 | 478 | 358 | 5.80E-78 | ||
| Gene3D | 219 | 367 | 149 | 3.80E-24 | – | |
| Gene3D | 368 | 465 | 98 | 1.60E-22 | – | |
| Gene3D | 473 | 489 | 17 | 3.90E-27 | – | |
| SUPERFAMILY | 520 | 666 | 147 | 1.30E-21 | – | |
| Gene3D | 522 | 659 | 138 | 3.90E-27 | – | |
| SUPERFAMILY | 522 | 534 | 13 | 1.75E-78 | ||
| SMART | 541 | 692 | 152 | 1.50E-04 | ||
| Pfam | 558 | 644 | 87 | 3.70E-10 | ||
| TMHMM | 660 | 682 | 23 | – | – | |
| Gene3D | 660 | 694 | 35 | 6.20E-07 | – | |
| Phobius | 664 | 682 | 19 | – | – | |
| Phobius | 683 | 703 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ionotropic glutamate receptor activity | Catalysis of the transmembrane transfer of an ion by a channel that opens when glutamate has been bound by the channel complex or one of its constituent parts. | ||
| Molecular function | Ligand-gated ion channel activity | Enables the transmembrane transfer of an ion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of Lj2g3v3403240.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v3403240.2, powered by CORGI.
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