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IPR001320 is a Ionotropic glutamate receptor, C-terminal.
<p>There are three classes of ionotropic glutamate receptors (iGluRs), namely NMDA (N-methyl-D-aspartate), AMPA (alpha-amino-3-hydroxy-5-methyl-4-isoxazole-4-propionic acid) and kainate receptors. They are believed to play critical roles in synaptic plasticity. At many synapses in the brain, transient activation of NMDA receptors leads to a persistent modification in the strength of synaptic transmission mediated by AMPA receptors and kainate receptors can act as the induction trigger for long-term changes in synaptic transmission [[cite:PUB00006459]].</p> <p>Ionotropic glutamate receptors (iGluRs) are a highly conserved family of ligand-gated ion channels present in animals, plants, and bacteria, which are best characterised for their roles in synaptic communication in vertebrate nervous systems [[cite:PUB00072709]]. A variant subfamily of iGluRs, the Ionotropic Receptors (IRs), consist of non-glutamate-binding chemosensory receptors first identified in Drosophila melanogaster. They function in detecting odors and tastants [[cite:PUB00072710]].</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Ligand-gated ion channel activity | Enables the transmembrane transfer of an ion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts. | ||
Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | PREDICTED: glutamate receptor 3.7-like [Glycine max] gi|356547081|ref|XP_003541946.1| | 26 | ||
– | PREDICTED: glutamate receptor 3.7-like [Glycine max] gi|356547081|ref|XP_003541946.1| | 29 | ||
– | Glutamate receptor 2.8 [Medicago truncatula] gi|357465943|ref|XP_003603256.1| | 21 | ||
– | PREDICTED: glutamate receptor 2.7-like [Glycine max] gi|356519637|ref|XP_003528477.1| | 19 | ||
– | Glutamate receptor 2.8 [Medicago truncatula] gi|357465943|ref|XP_003603256.1| | 24 | ||
– | Glutamate receptor 2.8 [Medicago truncatula] gi|357465943|ref|XP_003603256.1| | 20 | ||
– | Glutamate receptor 2.8 [Medicago truncatula] gi|357465943|ref|XP_003603256.1| | 21 | ||
– | Glutamate-gated kainate-type ion channel receptor subunit GluR5 [Medicago truncatula] gi|357467129|ref|XP_003603849.1| | 33 | ||
– | PREDICTED: glutamate receptor 3.6-like [Glycine max] gi|356496551|ref|XP_003517130.1| | 16 | ||
– | PREDICTED: glutamate receptor 3.6-like [Glycine max] gi|356529661|ref|XP_003533407.1| | 30 | ||
– | PREDICTED: glutamate receptor 3.2-like [Glycine max] gi|356553421|ref|XP_003545055.1| | 24 | ||
– | PREDICTED: glutamate receptor 3.2-like [Glycine max] gi|356553421|ref|XP_003545055.1| | 19 | ||
– | PREDICTED: glutamate receptor 3.2-like [Glycine max] gi|356553421|ref|XP_003545055.1| | 29 | ||
– | PREDICTED: glutamate receptor 3.4-like isoform X1 [Cicer arietinum] gi|502083253|ref|XP_004487403.1| | 28 | ||
– | PREDICTED: glutamate receptor 3.4-like [Glycine max] gi|356544812|ref|XP_003540841.1| | 26 | ||
– | PREDICTED: glutamate receptor 3.4-like [Glycine max] gi|356542088|ref|XP_003539503.1| | 9 | ||
– | PREDICTED: glutamate receptor 2.7-like [Glycine max] gi|356519637|ref|XP_003528477.1| | 23 | ||
– | PREDICTED: glutamate receptor 2.7-like [Glycine max] gi|356546603|ref|XP_003541714.1| | 20 | ||
– | PREDICTED: glutamate receptor 2.7-like [Cicer arietinum] gi|502078180|ref|XP_004485863.1| | 16 | ||
– | Glutamate receptor; TAIR: AT4G35290.1 glutamate receptor 2; Swiss-Prot: sp|Q93YT1|GLR32_ARATH Glutamate receptor 3.2; TrEMBL-Plants: tr|I1M634|I1M634_SOYBN Glutamate receptor; Found in the gene: LotjaGi1g1v0001000 | 29 | ||
– | Glutamate receptor; TAIR: AT4G35290.1 glutamate receptor 2; Swiss-Prot: sp|Q93YT1|GLR32_ARATH Glutamate receptor 3.2; TrEMBL-Plants: tr|I1M634|I1M634_SOYBN Glutamate receptor; Found in the gene: LotjaGi1g1v0001000 | 22 | ||
– | Glutamate receptor; TAIR: AT4G35290.1 glutamate receptor 2; Swiss-Prot: sp|Q93YT1|GLR32_ARATH Glutamate receptor 3.2; TrEMBL-Plants: tr|I1M634|I1M634_SOYBN Glutamate receptor; Found in the gene: LotjaGi1g1v0001000 | 25 | ||
– | Glutamate receptor; TAIR: AT4G35290.1 glutamate receptor 2; Swiss-Prot: sp|Q93YT1|GLR32_ARATH Glutamate receptor 3.2; TrEMBL-Plants: tr|I1M634|I1M634_SOYBN Glutamate receptor; Found in the gene: LotjaGi1g1v0001000 | 24 | ||
– | Glutamate receptor; TAIR: AT2G29120.1 glutamate receptor 2.7; Swiss-Prot: sp|Q8LGN0|GLR27_ARATH Glutamate receptor 2.7; TrEMBL-Plants: tr|A0A072VCN2|A0A072VCN2_MEDTR Glutamate receptor; Found in the gene: LotjaGi1g1v0373900_LC | 15 | ||
– | Glutamate receptor; TAIR: AT2G29120.1 glutamate receptor 2.7; Swiss-Prot: sp|Q8LGN0|GLR27_ARATH Glutamate receptor 2.7; TrEMBL-Plants: tr|G7J966|G7J966_MEDTR Glutamate receptor 3.2; Found in the gene: LotjaGi1g1v0374200 | 24 | ||
– | Glutamate receptor; TAIR: AT2G29120.1 glutamate receptor 2.7; Swiss-Prot: sp|Q8LGN0|GLR27_ARATH Glutamate receptor 2.7; TrEMBL-Plants: tr|G7J966|G7J966_MEDTR Glutamate receptor 3.2; Found in the gene: LotjaGi1g1v0376200 | 23 | ||
– | Glutamate receptor; TAIR: AT2G29120.1 glutamate receptor 2.7; Swiss-Prot: sp|Q8LGN0|GLR27_ARATH Glutamate receptor 2.7; TrEMBL-Plants: tr|G7J966|G7J966_MEDTR Glutamate receptor 3.2; Found in the gene: LotjaGi1g1v0376200 | 24 | ||
– | Glutamate receptor; TAIR: AT1G42540.1 glutamate receptor 3.3; Swiss-Prot: sp|Q9C8E7|GLR33_ARATH Glutamate receptor 3.3; TrEMBL-Plants: tr|A0A1J7I836|A0A1J7I836_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0567700 | 33 | ||
– | Glutamate receptor; TAIR: AT3G51480.1 glutamate receptor 3.6; Swiss-Prot: sp|Q84W41|GLR36_ARATH Glutamate receptor 3.6; TrEMBL-Plants: tr|G7K195|G7K195_MEDTR Glutamate receptor; Found in the gene: LotjaGi2g1v0353900 | 29 | ||
– | Glutamate receptor; TAIR: AT3G51480.1 glutamate receptor 3.6; Swiss-Prot: sp|Q84W41|GLR36_ARATH Glutamate receptor 3.6; TrEMBL-Plants: tr|G7K195|G7K195_MEDTR Glutamate receptor; Found in the gene: LotjaGi2g1v0353900 | 29 | ||
– | Glutamate receptor; TAIR: AT2G32400.1 glutamate receptor 5; Swiss-Prot: sp|Q9SDQ4|GLR37_ARATH Glutamate receptor 3.7; TrEMBL-Plants: tr|A0A0B2RVP7|A0A0B2RVP7_GLYSO Glutamate receptor; Found in the gene: LotjaGi3g1v0189800 | 26 | ||
– | Glutamate receptor; TAIR: AT2G32400.1 glutamate receptor 5; Swiss-Prot: sp|Q9SDQ4|GLR37_ARATH Glutamate receptor 3.7; TrEMBL-Plants: tr|A0A0B2RVP7|A0A0B2RVP7_GLYSO Glutamate receptor; Found in the gene: LotjaGi3g1v0189800 | 29 | ||
– | Glutamate receptor; TAIR: AT2G32400.1 glutamate receptor 5; Swiss-Prot: sp|Q9SDQ4|GLR37_ARATH Glutamate receptor 3.7; TrEMBL-Plants: tr|A0A0R0H9K3|A0A0R0H9K3_SOYBN Glutamate receptor; Found in the gene: LotjaGi3g1v0189800 | 26 | ||
– | Glutamate receptor; TAIR: AT1G05200.1 glutamate receptor 3.4; Swiss-Prot: sp|Q8GXJ4|GLR34_ARATH Glutamate receptor 3.4; TrEMBL-Plants: tr|G7IU03|G7IU03_MEDTR Glutamate receptor; Found in the gene: LotjaGi3g1v0189900 | 31 | ||
– | Glutamate receptor; TAIR: AT1G05200.1 glutamate receptor 3.4; Swiss-Prot: sp|Q8GXJ4|GLR34_ARATH Glutamate receptor 3.4; TrEMBL-Plants: tr|G7IU03|G7IU03_MEDTR Glutamate receptor; Found in the gene: LotjaGi3g1v0189900 | 31 | ||
– | Glutamate receptor; TAIR: AT1G05200.1 glutamate receptor 3.4; Swiss-Prot: sp|Q8GXJ4|GLR34_ARATH Glutamate receptor 3.4; TrEMBL-Plants: tr|A0A0L9V5X5|A0A0L9V5X5_PHAAN Glutamate receptor; Found in the gene: LotjaGi3g1v0465600 | 29 | ||
– | Glutamate receptor; TAIR: AT1G05200.5 glutamate receptor 3.4; Swiss-Prot: sp|Q8GXJ4|GLR34_ARATH Glutamate receptor 3.4; TrEMBL-Plants: tr|A0A0L9V5X5|A0A0L9V5X5_PHAAN Glutamate receptor; Found in the gene: LotjaGi3g1v0465600 | 25 | ||
– | Glutamate receptor; TAIR: AT2G29120.1 glutamate receptor 2.7; Swiss-Prot: sp|Q8LGN0|GLR27_ARATH Glutamate receptor 2.7; TrEMBL-Plants: tr|A0A072UMP3|A0A072UMP3_MEDTR Glutamate receptor 3.4; Found in the gene: LotjaGi4g1v0065400 | 24 | ||
– | Glutamate receptor; TAIR: AT2G29120.1 glutamate receptor 2.7; Swiss-Prot: sp|Q8LGN0|GLR27_ARATH Glutamate receptor 2.7; TrEMBL-Plants: tr|A0A072UMP3|A0A072UMP3_MEDTR Glutamate receptor 3.4; Found in the gene: LotjaGi4g1v0065500 | 23 | ||
– | Glutamate receptor; TAIR: AT3G51480.1 glutamate receptor 3.6; Swiss-Prot: sp|Q84W41|GLR36_ARATH Glutamate receptor 3.6; TrEMBL-Plants: tr|A0A0B2S0T6|A0A0B2S0T6_GLYSO Glutamate receptor; Found in the gene: LotjaGi4g1v0134800 | 29 | ||
– | Glutamate receptor; TAIR: AT3G51480.1 glutamate receptor 3.6; Swiss-Prot: sp|Q84W41|GLR36_ARATH Glutamate receptor 3.6; TrEMBL-Plants: tr|A0A0B2S0T6|A0A0B2S0T6_GLYSO Glutamate receptor; Found in the gene: LotjaGi4g1v0134800 | 29 | ||
– | Glutamate receptor; TAIR: AT3G51480.1 glutamate receptor 3.6; Swiss-Prot: sp|Q84W41|GLR36_ARATH Glutamate receptor 3.6; TrEMBL-Plants: tr|I1L4P7|I1L4P7_SOYBN Glutamate receptor; Found in the gene: LotjaGi4g1v0134800 | 25 | ||
– | Glutamate receptor; TAIR: AT3G51480.1 glutamate receptor 3.6; Swiss-Prot: sp|Q84W41|GLR36_ARATH Glutamate receptor 3.6; TrEMBL-Plants: tr|A0A0B2S0T6|A0A0B2S0T6_GLYSO Glutamate receptor; Found in the gene: LotjaGi4g1v0134800 | 29 | ||
– | Glutamate receptor; TAIR: AT2G29120.1 glutamate receptor 2.7; Swiss-Prot: sp|Q8LGN0|GLR27_ARATH Glutamate receptor 2.7; TrEMBL-Plants: tr|A0A151QV07|A0A151QV07_CAJCA Glutamate receptor; Found in the gene: LotjaGi6g1v0325800 | 24 | ||
– | Glutamate receptor; TAIR: AT2G29120.1 glutamate receptor 2.7; Swiss-Prot: sp|Q8LGN0|GLR27_ARATH Glutamate receptor 2.7; TrEMBL-Plants: tr|K7M1F5|K7M1F5_SOYBN Glutamate receptor; Found in the gene: LotjaGi6g1v0325900 | 25 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
mobidb-lite | MobiDBLite | 1 | 2.22 |