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| Field | Value |
|---|---|
| Gene ID | Lj2g3v3413340 |
| Transcript ID | Lj2g3v3413340.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: chloride channel protein CLC-e-like [Glycine max] gi|356554044|ref|XP_003545359.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 105 | 105 | – | – | |
| PANTHER | 94 | 466 | 373 | 4.80E-121 | – | |
| PANTHER | 94 | 466 | 373 | 4.80E-121 | – | |
| SUPERFAMILY | 98 | 441 | 344 | 8.37E-59 | ||
| TMHMM | 106 | 128 | 23 | – | – | |
| Phobius | 106 | 128 | 23 | – | – | |
| Gene3D | 107 | 465 | 359 | 1.70E-61 | ||
| CDD | 114 | 442 | 329 | 2.81E-50 | – | |
| Phobius | 129 | 155 | 27 | – | – | |
| TMHMM | 156 | 178 | 23 | – | – | |
| Phobius | 156 | 176 | 21 | – | – | |
| Phobius | 177 | 231 | 55 | – | – | |
| Pfam | 182 | 449 | 268 | 8.20E-49 | ||
| PRINTS | 189 | 208 | 20 | 4.00E-06 | ||
| Phobius | 232 | 256 | 25 | – | – | |
| TMHMM | 234 | 256 | 23 | – | – | |
| Phobius | 257 | 275 | 19 | – | – | |
| TMHMM | 269 | 291 | 23 | – | – | |
| Phobius | 276 | 293 | 18 | – | – | |
| Phobius | 294 | 313 | 20 | – | – | |
| TMHMM | 311 | 333 | 23 | – | – | |
| Phobius | 314 | 337 | 24 | – | – | |
| Phobius | 338 | 356 | 19 | – | – | |
| TMHMM | 353 | 375 | 23 | – | – | |
| Phobius | 357 | 377 | 21 | – | – | |
| Phobius | 378 | 474 | 97 | – | – | |
| PRINTS | 417 | 437 | 21 | 4.00E-06 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Voltage-gated chloride channel activity | Enables the transmembrane transfer of a chloride ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded. | ||
| Biological process | Chloride transport | The directed movement of chloride into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v3413340.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v3413340.1, powered by CORGI.
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