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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0012290 |
| Transcript ID | Lj3g3v0012290.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member 13-like [Cicer arietinum] gi|502080578|ref|XP_004486609.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 28 | 28 | – | – | |
| PANTHER | 9 | 463 | 455 | 6.80E-202 | – | |
| PANTHER | 9 | 463 | 455 | 6.80E-202 | – | |
| Phobius | 29 | 48 | 20 | – | – | |
| TMHMM | 29 | 48 | 20 | – | – | |
| Phobius | 49 | 67 | 19 | – | – | |
| Phobius | 68 | 89 | 22 | – | – | |
| TMHMM | 69 | 88 | 20 | – | – | |
| Phobius | 90 | 100 | 11 | – | – | |
| Phobius | 101 | 120 | 20 | – | – | |
| TMHMM | 103 | 120 | 18 | – | – | |
| Phobius | 121 | 126 | 6 | – | – | |
| TMHMM | 127 | 149 | 23 | – | – | |
| Phobius | 127 | 149 | 23 | – | – | |
| Phobius | 150 | 160 | 11 | – | – | |
| TMHMM | 159 | 181 | 23 | – | – | |
| Phobius | 161 | 181 | 21 | – | – | |
| Phobius | 182 | 325 | 144 | – | – | |
| SUPERFAMILY | 278 | 462 | 185 | 1.70E-18 | ||
| Gene3D | 278 | 461 | 184 | 8.30E-13 | – | |
| Pfam | 293 | 462 | 170 | 1.10E-16 | ||
| ProSiteProfiles | 294 | 463 | 170 | 20.29 | ||
| TMHMM | 321 | 343 | 23 | – | – | |
| Phobius | 326 | 343 | 18 | – | – | |
| Phobius | 344 | 415 | 72 | – | – | |
| Phobius | 416 | 442 | 27 | – | – | |
| TMHMM | 420 | 442 | 23 | – | – | |
| Phobius | 443 | 463 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | ATPase activity, coupled to transmembrane movement of substances | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj3g3v0012290.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0012290.2, powered by CORGI.
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