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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0140650 |
| Transcript ID | Lj3g3v0140650.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable sulfate transporter 3.4-like isoform 1 [Glycine max] gi|356556062|ref|XP_003546346.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 587 | 587 | 0 | ||
| PANTHER | 1 | 587 | 587 | 0 | ||
| Phobius | 1 | 19 | 19 | – | – | |
| TIGRFAM | 12 | 575 | 564 | 8.30E-177 | ||
| Phobius | 20 | 40 | 21 | – | – | |
| Pfam | 25 | 404 | 380 | 4.40E-121 | ||
| Phobius | 41 | 51 | 11 | – | – | |
| Phobius | 52 | 71 | 20 | – | – | |
| Phobius | 72 | 76 | 5 | – | – | |
| Phobius | 77 | 93 | 17 | – | – | |
| Phobius | 94 | 104 | 11 | – | – | |
| TMHMM | 105 | 127 | 23 | – | – | |
| Phobius | 105 | 129 | 25 | – | – | |
| Phobius | 130 | 134 | 5 | – | – | |
| Phobius | 135 | 154 | 20 | – | – | |
| TMHMM | 142 | 164 | 23 | – | – | |
| Phobius | 155 | 160 | 6 | – | – | |
| Phobius | 161 | 180 | 20 | – | – | |
| Phobius | 181 | 185 | 5 | – | – | |
| TMHMM | 185 | 204 | 20 | – | – | |
| Phobius | 186 | 202 | 17 | – | – | |
| Phobius | 203 | 213 | 11 | – | – | |
| Phobius | 214 | 236 | 23 | – | – | |
| TMHMM | 214 | 236 | 23 | – | – | |
| Phobius | 237 | 266 | 30 | – | – | |
| Phobius | 267 | 289 | 23 | – | – | |
| TMHMM | 267 | 289 | 23 | – | – | |
| Phobius | 290 | 342 | 53 | – | – | |
| TMHMM | 309 | 331 | 23 | – | – | |
| Phobius | 343 | 364 | 22 | – | – | |
| TMHMM | 344 | 366 | 23 | – | – | |
| Phobius | 365 | 369 | 5 | – | – | |
| Phobius | 370 | 388 | 19 | – | – | |
| TMHMM | 371 | 393 | 23 | – | – | |
| Phobius | 389 | 399 | 11 | – | – | |
| Phobius | 400 | 428 | 29 | – | – | |
| TMHMM | 406 | 428 | 23 | – | – | |
| Phobius | 429 | 587 | 159 | – | – | |
| ProSiteProfiles | 456 | 579 | 124 | 25.68 | ||
| Gene3D | 456 | 568 | 113 | 1.80E-20 | ||
| CDD | 457 | 572 | 116 | 5.69E-22 | – | |
| Pfam | 457 | 575 | 119 | 3.00E-27 | ||
| SUPERFAMILY | 462 | 578 | 117 | 2.16E-17 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Secondary active sulfate transmembrane transporter activity | Enables the secondary active transfer of sulfate from one side of a membrane to the other. Secondary active transport is the transfer of a solute across a membrane, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters. | ||
| Biological process | Sulfate transport | The directed movement of sulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Sulfate transmembrane transporter activity | Enables the transfer of sulfate ions, SO4(2-), from one side of a membrane to the other. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj3g3v0140650.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0140650.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.