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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0260460 |
| Transcript ID | Lj3g3v0260460.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | WD repeat-containing protein [Medicago truncatula] gi|357454851|ref|XP_003597706.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 32 | 32 | 10.074 | ||
| PANTHER | 1 | 213 | 213 | 2.20E-147 | – | |
| PANTHER | 1 | 213 | 213 | 2.20E-147 | – | |
| ProSiteProfiles | 1 | 221 | 221 | 21.568 | ||
| Gene3D | 4 | 215 | 212 | 2.60E-33 | ||
| Pfam | 4 | 70 | 67 | 6.20E-05 | – | |
| SUPERFAMILY | 5 | 215 | 211 | 1.30E-34 | ||
| PRINTS | 10 | 24 | 15 | 1.50E-05 | ||
| SMART | 26 | 64 | 39 | 3.20E-06 | ||
| ProSiteProfiles | 33 | 63 | 31 | 10.007 | ||
| SMART | 73 | 113 | 41 | 0.6 | ||
| SMART | 120 | 157 | 38 | 0.15 | ||
| Pfam | 125 | 156 | 32 | 0.043 | ||
| ProSiteProfiles | 127 | 156 | 30 | 9.406 | ||
| PRINTS | 144 | 158 | 15 | 1.50E-05 | ||
| SMART | 163 | 212 | 50 | 0.0022 | ||
| Pfam | 165 | 211 | 47 | 3.90E-04 | ||
| PRINTS | 199 | 213 | 15 | 1.50E-05 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj3g3v0260460.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0260460.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.