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Lj3g3v0274640.2

Overview

Field Value
Gene ID Lj3g3v0274640
Transcript ID Lj3g3v0274640.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Cicer arietinum] gi|502081133|ref|XP_004486776.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24326
1 15 15 1.30E-218 –
PANTHER
PTHR24326:SF217
1 15 15 1.30E-218 –
ProSiteProfiles
PS50848
60 261 202 24.824
IPR002913
CDD
cd08875
64 279 216 4.19E-78 –
SUPERFAMILY
SSF55961
69 279 211 4.12E-36 –
SMART
SM00234
69 279 211 2.10E-40
IPR002913
Gene3D
G3DSA:3.30.530.20
69 275 207 2.90E-22
IPR023393
Pfam
PF01852
70 278 209 7.00E-53
IPR002913
PANTHER
PTHR24326:SF217
458 513 56 1.30E-218 –
PANTHER
PTHR24326
458 513 56 1.30E-218 –
PANTHER
PTHR24326
535 746 212 1.30E-218 –
PANTHER
PTHR24326:SF217
535 746 212 1.30E-218 –
Pfam
PF08670
604 746 143 1.40E-50
IPR013978

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008289
Molecular function Lipid binding Interacting selectively and non-covalently with a lipid.
Subterm of

Genome browser

LORE1 insertions 37

Expression data

Expression pattern

Expression pattern of Lj3g3v0274640.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v0274640.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.